CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGAATCCGCGGA
ATTCAGAGTAATTTCCCATCATTAAAAAACTAGTTATTATTTAAGCCTTG
TTATTTTCATATTTCACCATTTATTTTTAAGTTATTACATTTGTAATGTT
TCCAGATTAATTATATTTTACTTAAATTATCTTGTAGACTAATATATATT
TTAAAATATTGACAAATATATACTGAAAAATAAATGCCTAACTAGAAAGG
CAATTTAAAGTTTGAATATTTGGAAATATATATTCAGATACTTCATCAAT
CTAACACTAAGAGAAGACACCAAAACTTTCTATTTGTGTAGGCTTTTAGA
AGATAGGTTTAATTGTATTCTGAATAGCATTTATGTTAGCTAGATCTGCT
GACACATTTCTTTAATTCTGGTACTTGAGGAACAGAGGTAGGTGAGTTCA
AGACCAGCCTGGTCTCCATGTGAAGTTCCTGGCTGCCAAGATTTTTATAC
TTTGTCTCATAAACAAACAAATAATACTGTTACGTTTCAATGCTCAGAAA
ATTAATCTATATACTTTTGTGAGCTTATATTTTCAAATTCAATTATATTC
ATTATTGAAACATTTAAAATGTACTTCATGTCCTGTTCAAATATGTTCTG
AGATTTATTGACAAATGGTAGCTGCTTTTCTTTAAAATTCATTCTTGATG
TATTTTTACTTACAATTTTCTACTATAATTGGGATTTATCTTATGAGTGA
GATN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCCACACTGTGATGACTACAGCAGCTCATATT
CCCACCCACAATTAATGAGAGTCTTCCTTTCCCCTGCATTCCTTTCACAC
TTATTGTCTGTTGTTCCATGTATTTTTTTATGCTTATTGGATAAGATGAA
ATCTCAAAGTTGTTTTGATTTGGACATACAAATTGCTAGTTATAATGAAC
TTTTTTCTTTTAGAAGTTTCTTAACTATGTTTTCCTTCTTTTGAATTTTT
TTTTCTGTTGCAAGGCCCAGTTTTTGAATGGGTCATTTTTGATTGTATGT
TTCTTTAGTTTTGACTATTTACATATTTAGTTCTTTGTATATTCTGGATA
TGAGACCTCTATAATATGTATAGGTGACAAAATTGTCTCCCATTCTGTGG
GCTTTTTCTTTACCCGGGTGGTTGTTTTTTAGCTATGCAGAAGCTTTTCC
AGATTCTTGAATTATCTGTTTTAGTCATCCTTTCATTACTGTGCAGACAA
CATGACCAAGGTAACTTTTATAAAAGAAGGCATTTAATTCAGAGGATCTG
GCCATTATCATGACAGGAAGCATGGTGGGGAAGAGGGCCTGACCAACATG
CTGAAGAAGTAGCTGAAAGCTACATTCTAATTTGTAGGCAAGGCAAGAGA
GAGAAAGAGGGGGGAGGCAGGAAGTGGGAGGGAGAGACAGAGACAGA

Query= MSMg01no325_p17.b1 MSMg01no325_p17.b1 CHROMAT_FILE:
MSMg01no325_p17.b1 PHD_FILE: MSMg01no325_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:35 2005
         (709 letters)



>mm_chr1_8265929_8267037
          Length = 1109

 Score =  745 bits (385), Expect = 0.0
 Identities = 400/405 (98%)
 Strand = Plus / Minus

                                                                        
Query: 305  agaagataggtttaattgtattctgaatagcatttatgttagctagatctgctgacacat 364
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 agaagataggtttaattatattctgaatagcatttatgttagctagatctgctgacacat 1024

                                                                        
Query: 365  ttctttaattctggtacttgaggaacagaggtaggtgagttcaagaccagcctggtctcc 424
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1023 ttctttaattctggtacttgaggaacagaggtaggggagttcaagaccagcctggtctcc 964

                                                                        
Query: 425  atgtgaagttcctggctgccaagatttttatactttgtctcataaacaaacaaataatac 484
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 963  atgtgaagttcctggctgccaacatttttatactttgtctcataaacaaacaaataatac 904

                                                                        
Query: 485  tgttacgtttcaatgctcagaaaattaatctatatacttttgtgagcttatattttcaaa 544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903  tgttacgtttcaatgctcagaaaattaatctatatacttttgtgagcttatattttcaaa 844

                                                                        
Query: 545  ttcaattatattcattattgaaacatttaaaatgtacttcatgtcctgttcaaatatgtt 604
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 843  ttcaattatattcattattgaaacatttaaaatgtacttcatgttctgttcaaatatgtt 784

                                                                        
Query: 605  ctgagatttattgacaaatggtagctgcttttctttaaaattcattcttgatgtattttt 664
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 783  ctgagatttattgacaaatagtagctgcttttctttaaaattcattcttgatgtattttt 724

                                                         
Query: 665  acttacaattttctactataattgggatttatcttatgagtgaga 709
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723  acttacaattttctactataattgggatttatcttatgagtgaga 679


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1109
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1099
Effective search space:   768201
Effective search space used:   768201
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)