Query= MSMg01no326_o06.b1 MSMg01no326_o06.b1 CHROMAT_FILE:
MSMg01no326_o06.b1 PHD_FILE: MSMg01no326_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:40 2005
(671 letters)
>mm_chr1_77901217_77902284
Length = 1068
Score = 1232 bits (637), Expect = 0.0
Identities = 657/665 (98%), Gaps = 3/665 (0%)
Strand = Plus / Minus
Query: 7 gaattcattctattctggagacatagttgttgtgataggacagccaaatgccaaatgtct 66
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 868 gaattcattccattctggagacata---gttgtgataggacagccaaatgccaaatgtct 812
Query: 67 tccagtgatccttctcttctttagtaatcagagcatatgaacgttgaagacacatttatc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tccagtgatccttctcttctttagtaatcagagcatatgaacgttgaagacacatttatc 752
Query: 127 ctaaaaattctatagggaagatagtagccaaataggtcattgctgtgagtaactacagtg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ctaaaaattctatagggaagatagtagccaaataggtcattgctgtgagtaactacagtg 692
Query: 187 aaatgatggcagggatcttctgagggaccatgtggaatacatcttggtatttttccccta 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aaatgatggcagggatcttctgagggaccatgtggaatacatcttggtatttttccccta 632
Query: 247 agaagagagggagatgatgtattgatctactaactctcacccttcattgattgaggattg 306
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 631 agaagagagggagatgatgtattgatctattaactctcacccttcattgattgaggattg 572
Query: 307 ctcttaagaggcttagtttgttgacatttctagtccatctggttcacaggttaagaacac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ctcttaagaggcttagtttgttgacatttctagtccatctggttcacaggttaagaacac 512
Query: 367 tcctggcaacaggctgaggtgcaggtgtctgaggctagaaagtgctcagatttatgaact 426
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tcctgggaacaggctgaggtgcaggtgtctgaggctagaaagtgctcagatttatgaact 452
Query: 427 gtctcatcaagctcaaagtgacctctggggtcaactaaagagctgtataaaaggttctag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gtctcatcaagctcaaagtgacctctggggtcaactaaagagctgtataaaaggttctag 392
Query: 487 cagcattatattggtccagcttttgtacttttcagaaactctcagaccctgcatttcatc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cagcattatattggtccagcttttgtacttttcagaaactctcagaccctgcatttcatc 332
Query: 547 tattgcatcctttctactacaaaatgagaaagatgcctgtataagaccacccaccaaaca 606
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tattgcatcctttctactacagaatgagaaagatgcctgtataagaccacccaccaaaca 272
Query: 607 cttaatataaagtatagtcccaggacatctatagaagatcactgtggggcacggtggtag 666
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 271 cttaatataaagtatagtcccaggacatctatagaagatcactgtgggtcacggtggtag 212
Query: 667 aggaa 671
|||||
Sbjct: 211 aggaa 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1068
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1058
Effective search space: 699338
Effective search space used: 699338
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_o06.g1 MSMg01no326_o06.g1 CHROMAT_FILE:
MSMg01no326_o06.g1 PHD_FILE: MSMg01no326_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:40 2005
(344 letters)
>mm_chr1_77713189_77713932
Length = 744
Score = 596 bits (308), Expect = e-175
Identities = 335/344 (97%), Gaps = 2/344 (0%)
Strand = Plus / Plus
Query: 1 attccttcggattttaaaggggctgggcttataggataccagtgatctttttctacttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccttcggattttaaaggggctgggcttataggataccagtgatctttttctacttgt 260
Query: 61 cttagcactgatgc-tcccttcctctctttttcatgtgattgtatctactgacacaccca 119
||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 cttagcactga-gcctcccttcctctccttttcatgtgattgtatctactgacacaccca 319
Query: 120 taactcattgaacgtaatattgggagaaggacccatgagggggatgcatctatgagagtt 179
| ||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 320 tgcctcattgaacggaatgttgggagaaggacccatgaggaggatgcatctatgagagtt 379
Query: 180 aaagacaaaactagagattgctttttaccatgagcagattgaaatgtgccaagccgtgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaagacaaaactagagattgctttttaccatgagcagattgaaatgtgccaagccgtgct 439
Query: 240 tcaagtactaaatcatttgcttatatgtttagtatatggaaatcagttatatttggcatt 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaagtacgaaatcatttgcttatatgtttagtatatggaaatcagttatatttggcatt 499
Query: 300 cataattagcattcacaaataaataaacaagaacatacaatata 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cataattagcattcacaaataaataaacaagaacatacaatata 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
