Query= MSMg01no327_o04.b1 MSMg01no327_o04.b1 CHROMAT_FILE:
MSMg01no327_o04.b1 PHD_FILE: MSMg01no327_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:52 2005
(375 letters)
>mm_chr1_69036178_69036952
Length = 775
Score = 679 bits (351), Expect = 0.0
Identities = 366/371 (98%), Gaps = 2/371 (0%)
Strand = Plus / Minus
Query: 5 gaattcatgctgattaccattccattttgtttagataccacatttttactatccattcat 64
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gaattcatgctgaataaaattccattttgtttagataccacatttttactatccattcat 706
Query: 65 gtaactgtgggcctacaggttgataccattttctagatctcaggcacagataacaatgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gtaactgtgggcctacaggttgataccattttctagatctcaggcacagataacaatgca 646
Query: 125 tatggataaggaacaaatatctctctaagataatgtagattgctttgggtataaacttag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tatggataaggaacaaatatctctctaagataatgtagattgctttgggtataaacttag 586
Query: 185 gaatgatatagataagttataaatttgggccttttaccattataaataattcataatttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gaatgatatagataagttataaatttgggccttttaccattataaataattcataatttg 526
Query: 245 agcttattttttacctttgctatttatggtcagccattccttaagcgacttgcataacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agcttattttttacctttgctatttatggtcagccattccttaagcgacttgcataacat 466
Query: 305 gtttttgtna-tatttatgtatgcaaatatatttcaatgactgaaaaagacaactagaaa 363
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gtttttgt-actatttatgtatgcaaatatatttcaatgactgaaaaagacaactagaaa 407
Query: 364 actttataaag 374
|||||||||||
Sbjct: 406 actttataaag 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_o04.g1 MSMg01no327_o04.g1 CHROMAT_FILE:
MSMg01no327_o04.g1 PHD_FILE: MSMg01no327_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:52 2005
(344 letters)
>mm_chr1_68870750_68871493
Length = 744
Score = 663 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Plus
Query: 1 attctgaaatttatgactgtctcctcacatttttgactgccctgcaatactttattccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgaaatttatgactgtctcctcacatttttgactgccctgcaatactttattccac 260
Query: 61 tttaaaactagctttgttttccagcttaagagttaaatctggaatacttttctactagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaaaactagctttgttttccagcttaagagttaaatctggaatacttttctactagag 320
Query: 121 aataaatacatggtagtccccttgtgcctcttgctcctagaataactcatgccaagaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataaatacatggtagtccccttgtgcctcttgctcctagaataactcatgccaagaact 380
Query: 181 tctgtttttatttacctagcatgtcttgccttcacatactgtttaatacaataagaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgtttttatttacctagcatgtcttgccttcacatactgtttaatacaataagaaagg 440
Query: 241 aaatgtttacaacagcaaatccttccaatggtgtgtggttgaaattcccaccctccctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgtttacaacagcaaatccttccaatggtgtgtggttgaaattcccaccctccctgg 500
Query: 301 caaattcggcaattgatttcttatctttctgtttccagtgtaa 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaattcggcaattgatttcttatctttctgtttccagtgtaa 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
