Query= MSMg01no327_o06.b1 MSMg01no327_o06.b1 CHROMAT_FILE:
MSMg01no327_o06.b1 PHD_FILE: MSMg01no327_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:53 2005
(373 letters)
>mm_chr1_82183020_82183790
Length = 771
Score = 673 bits (348), Expect = 0.0
Identities = 361/366 (98%), Gaps = 2/366 (0%)
Strand = Plus / Plus
Query: 8 gaattcatacattgcttcattttttttaatgaggaaatgaaataggacttaatcattgca 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatacattgcttcattttttttaatgaggaaatgaaataggacttaatcattgca 267
Query: 68 attttgggtttcagagatctatttggaacaaacattatatgattgtataatatagtatat 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 attttgggtttcagagatctatttggaacaaacattatatgattgtataatatagtatat 327
Query: 128 aagatatctgactagttaatataattatctacacacacacacaatgtgccactaccactc 187
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 328 aagatatctgactagttaatataattatctacacacacaca--atgtgccactaccactc 385
Query: 188 tataataatgtcattgacttattaaactgaggagacaagaatattttttcaatgttgtgc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tataataatgtcattgacttattaaactgaggagacaagaatattttttcaatgttgtgc 445
Query: 248 gagagaacattggttgggtcctcggcaacattacaaatagaggaggatcggaccacaaga 307
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 446 gagagaacattggttgggtcctaggcaacattacaaatagaggaggatcggaccacaaga 505
Query: 308 atgtcaaccaagaaaacccagcgtagtgggagggataagaatttgggctaaggcgtggaa 367
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 506 atgtcaaccaagaaaatccagcgtagtgggagggataagaatttgggctaaggtgtggaa 565
Query: 368 agaaga 373
||||||
Sbjct: 566 agaaga 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 771
Length adjustment: 9
Effective length of query: 364
Effective length of database: 762
Effective search space: 277368
Effective search space used: 277368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_o06.g1 MSMg01no327_o06.g1 CHROMAT_FILE:
MSMg01no327_o06.g1 PHD_FILE: MSMg01no327_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:53 2005
(346 letters)
>mm_chr1_82342513_82343260
Length = 748
Score = 603 bits (312), Expect = e-177
Identities = 339/348 (97%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 1 acctctacctcttggagactgagtggcctaattattaaagaacagatgggacaggagata 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 acctctacctcttggagattgagtggcctaattattaaagaacagatgggacaggagata 370
Query: 61 ctacatatagtcacgcccccaaccttattcttcatcccagaggagaagctagaacaatgt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 369 ctacatatagtcacgcccccaaccttattcttcatcccagaggagaagatagaacaatgt 310
Query: 121 actatatagctagaaccctgtgtgttgactggcacttcagataaaatctgtcctaactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 actatatagctagaaccctgtgtgttgactggcacttcagataaaatctgtcctaactga 250
Query: 181 actcaccttcctct-tcccccccaccccccc-gagaacaaagggcaggcataagggacaa 238
|||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 249 actcaccttcctctctcccccccccccccccagagaacaaagggcaggcataagggacaa 190
Query: 239 tgacaagagataagtgggtgagggaaaagggaaaaggtatttgtctctggatagagagaa 298
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tgacaagagataagtggatgagggaaaagggaaaaggtatttgtctctggatagagagaa 130
Query: 299 aacagtgtggcccacagacaaatggtggttaataaaggggaaaccccg 346
||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 129 aacagcatggcccacagacaaatggtggttaataaaagggaaaccccg 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 748
Length adjustment: 9
Effective length of query: 337
Effective length of database: 739
Effective search space: 249043
Effective search space used: 249043
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
