TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACTGTTATTGCATGACCTTGACAGAGGATCAGAGTGCTGCTGTT
ATATTGTGTAGACTGCCTCTCAGGTGAAGTTTGGCTGATGCTTTTAACCT
TATCAGAGACGTGGGCTTGGAGGAGAGAGACAGATACCATGGTCCCTTAT
AGCAGCTAGTCCTGCTAGCAAGACACCTACTGCTGTTGAACATCTACTGA
AGGTTGTTTGCCACGTGGTTCCTGCATTTGGATTTCTATAAGAAAATGTA
ACAAAGTTTCATAAACTTTGTGATTTACTACCAAATGAAGTATTTAGAAG
CAGCTCTTAGGCTTGTATGTCTATCTGCTCTTTTCTCGCTGTGTCTTCAC
CTTGTGAAAGGGAGAAAGCTCCCCCGCGTTTTTGGATTTTGGTTTTTAGC
TTCTATTTTGTTTTCATTTTTGCTTTGTTTCACGATCCGTTCCCTCTCTG
TACTATCTTTCCCTACCCCTTGTTAAGCTTTCCTCTTTAAGACCCTTTCT
TTCATCCTTTCCTTTTTATCACTTTTTTCTTCTTAATCGATTCCGTTTTT
TCACTCTTTTTGCCCTTCTTTTATGTCCCTTTTCCCCTTTCCACTGACGC
TTTCATCCCCCTCCTCTCCGCCCATTGCATCTCCCTCTCTTCCACTTTTT
CACCTTTCCCCTATATCCCTCACATTTCTTTCATATCCCCTCTCTTTCTT
TATCCCTCTACCCTCTTCATTTTCTTCTTCCTCTTCTTCTTATCCCCTAC
CN

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGAATAATCCAAATGCTTAAATTTTAG
GATGATGTTAGACTTTTTAAAGGCTAACTCATGTAAGATATTACTTGGAT
GGGTGCATTTTCTAGTTATTCTGCAGAATTAGTTCTCAATACCAGAAGCA
TATAGATTTTGAATAGTAGCAGAATTATAACCTACTTTGTGATTTGTTTT
TATTTTGTGCAATGTACAATCTTTATGTGAAATAAGAAACAAATGTAAAA
TACATAGTCATATAGATAATGCATATATATCATGTGTATAGACATACATT
TATATACTAGAAATAAGGAGATAAAATACATACATAGGGGTTGTCGAGGA
GCCTCAGTGGGTAAGAGAGCCCACGATGCAAACATGAGGACCTGTGTTCA
TGGATGTAAAATGTTATGTTTTACCACTCATGCAGGAAAGTCCGTTGCTC
TAGAAGGCAGAGACGGAAAATCATTAGGCTCTACTGGCTTAGCATAGCAC
TGGGGAGACTTGGAGACACGGTATCAAAGTAAGTAGATTAGAATGATGTA
GTAGCTATTTAATGTCCTCCTCTGATTTCCATAACTACCCATGTACATGC
ATACCATGCTCCCAGCGGGACCTGCTTATTAATATGTAAACACTTTGGCC
CGATTACATGTTTGTATTCATATAACAATTAGTTTAATCGCAAGGCAAAC
TTATTATC

Query= MSMg01no327_p04.b1 MSMg01no327_p04.b1 CHROMAT_FILE:
MSMg01no327_p04.b1 PHD_FILE: MSMg01no327_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:57 2005
         (374 letters)



>mm_chr1_81329607_81330380
          Length = 774

 Score =  669 bits (346), Expect = 0.0
 Identities = 364/370 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccactgttattgcatgaccttgacagaggatcagagtgctgctgttatattgtgt 64
           ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattccactgttattggatgaccttgacagaggatcagagtgctgctgttacattgtgt 264

                                                                       
Query: 65  agactgcctctcaggtgaagtttggctgatgcttttaaccttatcagagacgtgggcttg 124
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 agactgcctctcaggtgaagtttggctgatgcttttaaccttatcagagatgtgggcttg 324

                                                                       
Query: 125 gaggagagagacagataccatggtcccttatagcagctagtcctgctagcaagacaccta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaggagagagacagataccatggtcccttatagcagctagtcctgctagcaagacaccta 384

                                                                       
Query: 185 ctgctgttgaacatctactgaaggttgtttgccacgtggttcctgcatttggatttctat 244
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 385 ctgctgttgaacatctactgaaggttgtttgccacgtggttcctgcttttggatttctat 444

                                                                       
Query: 245 aagaaaatgtaacaaagtttcataaactttgtgatttactaccaaatgaagtatttagaa 304
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 aagaaaatgtaacaaagtttcataaactttgtgatttacaaccaaatgaagtatttagaa 504

                                                                       
Query: 305 gcagctcttaggcttgtatgtctatctgctcttttctcgctgtgtcttcaccttgtgaaa 364
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaactcttaggcttgtatgtctatctgctcttttctcgctgtgtcttcaccttgtgaaa 564

                     
Query: 365 gggagaaagc 374
           ||||||||||
Sbjct: 565 gggagaaagc 574


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space:   279225
Effective search space used:   279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no327_p04.g1 MSMg01no327_p04.g1 CHROMAT_FILE:
MSMg01no327_p04.g1 PHD_FILE: MSMg01no327_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:57 2005
         (453 letters)



>mm_chr1_81502551_81503403
          Length = 853

 Score =  822 bits (425), Expect = 0.0
 Identities = 446/453 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaataatccaaatgcttaaattttaggatgatgttagactttttaaaggctaactcatg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 653 agaataatccaaatgcttaaattttaggatgatgttagactttttaaaggctaacttatg 594

                                                                       
Query: 61  taagatattacttggatgggtgcattttctagttattctgcagaattagttctcaatacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 taagatattacttggatgggtgcattttctagttattctgcagaattagttctcaatacc 534

                                                                       
Query: 121 agaagcatatagattttgaatagtagcagaattataacctactttgtgatttgtttttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 agaagcatatagattttgaatagtagcagaattataacctactttgtgatttgtttttat 474

                                                                       
Query: 181 tttgtgcaatgtacaatctttatgtgaaataagaaacaaatgtaaaatacatagtcatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tttgtgcaatgtacaatctttatgtgaaataagaaacaaatgtaaaatacatagtcatat 414

                                                                       
Query: 241 agataatgcatatatatcatgtgtatagacatacatttatatactagaaataaggagata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agataatgcatatatatcatgtgtatagacatacatttatatactagaaataaggagata 354

                                                                       
Query: 301 aaatacatacataggggttgtcgaggagcctcagtgggtaagagagcccacgatgcaaac 360
           |||||||||||||||||||||||||||||||| ||| |||||||||   |||||||||||
Sbjct: 353 aaatacatacataggggttgtcgaggagcctcggtgagtaagagagtttacgatgcaaac 294

                                                                       
Query: 361 atgaggacctgtgttcatggatgtaaaatgttatgttttaccactcatgcaggaaagtcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atgaggacctgtgttcatggatgtaaaatgttatgttttaccactcatgcaggaaagtcc 234

                                            
Query: 421 gttgctctagaaggcagagacggaaaatcatta 453
           ||||||||||||||||||||| |||||||||||
Sbjct: 233 gttgctctagaaggcagagacagaaaatcatta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space:   373449
Effective search space used:   373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)