Query= MSMg01no328_j11.b1 MSMg01no328_j11.b1 CHROMAT_FILE:
MSMg01no328_j11.b1 PHD_FILE: MSMg01no328_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:47 2005
(348 letters)
>mm_chr1_69642316_69643063
Length = 748
Score = 650 bits (336), Expect = 0.0
Identities = 342/344 (99%)
Strand = Plus / Plus
Query: 1 agagtaaaattaaaatctcttctcttctcccaatcaaaccatctaatgatggagaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtaaaattaaaatctcttctcttctcccaatcaaaccatctaatgatggagaagaag 260
Query: 61 aaataagtaactcagaaatcccggccactaattggttaagggaagagtcagcttcagatc 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 aaataagtaactcagaaatcccggccactaattggtcaagggaagagtcagcttcagatc 320
Query: 121 tttttgcccccttttgacttcctctggtgatcgtcctgagggttgccagtcagctacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttgcccccttttgacttcctctggtgatcgtcctgagggttgccagtcagctacttc 380
Query: 181 tcttttaaacttcttttgctactgggcagtatactgagtcgaaactagctaagataagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttttaaacttcttttgctactgggcagtatactgagtcgaaactagctaagataagta 440
Query: 241 gtgcggagagactgtctacacatcacagcctttatcatcattatcatccttttcagtctt 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcggagagacagtctacacatcacagcctttatcatcattatcatccttttcagtctt 500
Query: 301 tgggtagtgaacctgtctaataaatgttgccacgtaccttattc 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggtagtgaacctgtctaataaatgttgccacgtaccttattc 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_j11.g1 MSMg01no328_j11.g1 CHROMAT_FILE:
MSMg01no328_j11.g1 PHD_FILE: MSMg01no328_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:47 2005
(338 letters)
>mm_chr1_69815229_69815968
Length = 740
Score = 617 bits (319), Expect = 0.0
Identities = 335/341 (98%), Gaps = 4/341 (1%)
Strand = Plus / Minus
Query: 1 aaaacactcatggggattatttgtagtgctttttttttt--ttttt-ctctttcattttt 57
|||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 540 aaaacactcatggggattgtttgtagtgctttttttttttctttttcctctttcattttt 481
Query: 58 gaaggagggtgtgctctgtgggacagaagacagtttaaagcgacattacagccctggatg 117
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggaggagggtgtgctctgtgggacagaagacagtttaaagcgacattacagccctggatg 421
Query: 118 aacaaagaagccactgaccgcagctgatgagcgtgctctggtgagcagaggtttgcaagg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aacaaagaagccactgaccgcagctgatgagcgtgctctggtgagcagaggtttgcaagg 361
Query: 178 ctcctcagcggaggggaggtttctaacggtctcctgctgacttcaaatgtgttcacagcc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctcctcagcggaggggaggtttctaacggtctcctgctgacttcaaatgtgttcacagcc 301
Query: 238 tacacgcagcagtccacagtggaaacttaccagtgtgataataatcactttgactgagac 297
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tacacgcagcag-ccacagtggaaacttaccagtgtgataataatcactttgactgagac 242
Query: 298 tgtggtgcggaccctcttcccccaaccagaaatcccccaac 338
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtggtgcggaccctcttcccccaaccagaaatcccccaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 740
Length adjustment: 9
Effective length of query: 329
Effective length of database: 731
Effective search space: 240499
Effective search space used: 240499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
