Query= MSMg01no329_i17.b1 MSMg01no329_i17.b1 CHROMAT_FILE:
MSMg01no329_i17.b1 PHD_FILE: MSMg01no329_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:02 2005
(549 letters)
>mm_chr1_126597734_126598682
Length = 949
Score = 826 bits (427), Expect = 0.0
Identities = 433/435 (99%)
Strand = Plus / Minus
Query: 5 gaattcattctatagttccaaaaaaaaagtatatgaacctctggctcaaggattcctaat 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaattcattctatagtttcaaaaaaaaagtatatgaacctctggctcaaggattcctaat 376
Query: 65 cctctttgactttatccctttcaatacagaaattctatcatcaccttcctaagcatgcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cctctttgactttatccctttcaatacagaaattctatcatcaccttcctaagcatgcta 316
Query: 125 gatggatgaacaacattgtgcatatgtgttcctgggtgtccatgcattcacgtatgtctt 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gatggacgaacaacattgtgcatatgtgttcctgggtgtccatgcattcacgtatgtctt 256
Query: 185 ctcttgggtacgtatgtggtagagaaggttgattatatgccaaatgtatgtggtgccctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctcttgggtacgtatgtggtagagaaggttgattatatgccaaatgtatgtggtgccctt 196
Query: 245 ggaagtaagaagacagtgtctgaatgcctcgagttagagttataggcagtcgtaagctgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggaagtaagaagacagtgtctgaatgcctcgagttagagttataggcagtcgtaagctgc 136
Query: 305 ccagtacaagttttggtaaccaaacttggtctactggaagagcagcaagccctatcacgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ccagtacaagttttggtaaccaaacttggtctactggaagagcagcaagccctatcacgt 76
Query: 365 gctgagatatctctctagccccgaccttagttttcaacacaaggtctgtcatagtcctgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 gctgagatatctctctagccccgaccttagttttcaacacaaggtctgtcatagtcctgg 16
Query: 425 caatcaccatttgct 439
|||||||||||||||
Sbjct: 15 caatcaccatttgct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_i17.g1 MSMg01no329_i17.g1 CHROMAT_FILE:
MSMg01no329_i17.g1 PHD_FILE: MSMg01no329_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:02 2005
(548 letters)
>mm_chr1_126531080_126532027
Length = 948
Score = 922 bits (477), Expect = 0.0
Identities = 537/573 (93%), Gaps = 28/573 (4%)
Strand = Plus / Plus
Query: 1 ctggcttgcttgcactaacatcttaaccaaatatgcaaaaactatttgtactggaggggg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ctggcttgcttgcactaacatcttaaccaaatatgcaaaaaccatttgtactggaggggg 260
Query: 61 acctactcctctgtgtccctgtgcatgtttgccacaggtgttcacttacaatgcagaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctactcctctgtgtccctgtgcatgtttgccacaggtgttcacttacaatgcagaaga 320
Query: 121 gggcagggccaacctaaatctacattataggcttccccattctcaatgcttagatgtggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggcagggccaacctaaatctacattataggcttccccattctcaatgcttagatgtggc 380
Query: 181 agcattctcaggctctgctacaattaaaatttcagctctggttatgagagataaaatttt 240
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 agcattctcaggctctgctgcaatcaaaatttcagctctggttatgagagataaaatttt 440
Query: 241 taaaaatactcaatgctcaaagtagacatagagctgggccatcaagaaaatgctgtttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaaatactcaatgctcaaagtagacatagagctgggccatcaagaaaatgctgtttcc 500
Query: 301 cattctgctagatttcttagccaaggttgttctttaaaatcaaagaaaattttatctcct 360
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 tattctgctagatttcttagccaaggttgttctttaaaatcaaagaaaaatttatctcct 560
Query: 361 attcatgagacaaggaggtctctgtatgacaccaggagaaatttggcttctaggcaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attcatgagacaaggaggtctctgtatgacaccaggagaaatttggcttctaggcaataa 620
Query: 421 gtaaagtataattatatatgtgtatgtatatatatatat------atatata--taca-- 470
|||||||||||||||||||||||||||| |||||||||| ||||||| ||||
Sbjct: 621 gtaaagtataattatatatgtgtatgtacatatatatatgtgtgtatatatacatacata 680
Query: 471 ca------------------catacatctatatctatctgtctggatggatggatagata 512
|| ||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 681 catacatacatacatacatacatacatctatatctatctgtctggatagatagatagata 740
Query: 513 gatagatagatagatagatagatagatagatag 545
|||||||||||||||||||||||||||||||||
Sbjct: 741 gatagatagatagatagatagatagatagatag 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
