Query= MSMg01no330_c03.b1 MSMg01no330_c03.b1 CHROMAT_FILE:
MSMg01no330_c03.b1 PHD_FILE: MSMg01no330_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:48 2005
(456 letters)
>mm_chr1_48823540_48824394
Length = 855
Score = 859 bits (444), Expect = 0.0
Identities = 453/456 (99%), Gaps = 1/456 (0%)
Strand = Plus / Minus
Query: 1 gtcacaatttagttttacaaatggagggggtgagtaaatttgcataaaaaacaaggaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gtcacaatttagttttacaaatggagggggtgagtaaatttgcataaaaaacaaggaact 596
Query: 61 tctttccacgttgcattttacttttgcttggtttatgtacggtttactcatgggaactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tctttccacgttgcattttacttttgcttggtttatgtacggtttactcatgggaactat 536
Query: 121 ggtagtttggtgatgcaatgaatggacagaaaaggatgcaaaaaccaaccagtgatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggtagtttggtgatgcaatgaatggacagaaaaggatgcaaaaaccaaccagtgatatgt 476
Query: 181 catcatcaaaacagcagggattcagatcatgactagatttttattattgaaactggtact 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 catcatcaaaacagcagggattcagatcatgactagatttttattattgaaactggtac- 417
Query: 241 cttcaagtgacagagacttggagcaaatttagttctatgtcctaacaactttagttccag 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cagcaagtgacagagacttggagcaaatttagttctatgtcctaacaactttagttccag 357
Query: 301 ctgcattatcaatacctggatattgggaataattgaagatgttttgattataaaccacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctgcattatcaatacctggatattgggaataattgaagatgttttgattataaaccacaa 297
Query: 361 gagtcccaatcactgaaagaaacactttcaatataagttcaataattcaaagaagctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gagtcccaatcactgaaagaaacactttcaatataagttcaataattcaaagaagctttg 237
Query: 421 ttatcaaatattaaaatatttatgcttgagcaaata 456
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttatcaaatattaaaatatttatgcttgagcaaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 855
Length adjustment: 10
Effective length of query: 446
Effective length of database: 845
Effective search space: 376870
Effective search space used: 376870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_c03.g1 MSMg01no330_c03.g1 CHROMAT_FILE:
MSMg01no330_c03.g1 PHD_FILE: MSMg01no330_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:48 2005
(293 letters)
>mm_chr1_48672877_48673569
Length = 693
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Plus
Query: 1 actttgtagaccaggcaggctggcctcgaactcagaaatcctcctgcctctgccttccaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 actttgtagaccaggcaggctggcctcgaactcagaaatcctcctgtctctgccttccaa 260
Query: 61 gtgctgggattaaaggcatgttccaccacaccggtgaaaaatttaattattgactcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgctgggattaaaggcatgttccaccacaccggtgaaaaatttaattattgactcaaga 320
Query: 121 gaatttcaagaatgtttcaaaaggagaatcatagagaaattgatggtattttgggtattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatttcaagaatgtttcaaaaggagaatcatagagaaattgatggtattttgggtattt 380
Query: 181 ggagtaatggaataggtagtcagtcctacatcacgtatattctgtctaattgtttctgag 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ggagtaatggaataggtagtcagtcctacatcacttatattctgtctaattgtttctgag 440
Query: 241 tttctctgaatgccattttagatctttactttcatgatctctgagttaggga 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctctgaatgccattttagatctttactttcatgatctctgagttaggga 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
