Query= MSMg01no330_i11.b1 MSMg01no330_i11.b1 CHROMAT_FILE:
MSMg01no330_i11.b1 PHD_FILE: MSMg01no330_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:15 2005
(238 letters)
>mm_chr1_97773292_97773931
Length = 640
Score = 383 bits (198), Expect = e-111
Identities = 220/228 (96%), Gaps = 2/228 (0%)
Strand = Plus / Minus
Query: 13 agcacagaaatccatgtgggtgacacagccaatgggatgatatgggaagtgaggttttac 72
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 440 agcacagaaatccatgtgggtgacacagccaatgggatgatatgggaagtgaggttgtac 381
Query: 73 agtcttattactatatggaactttctaaggagataattttaaaggaagatagtactaa-- 130
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agtcttgttactatatggaactttctaaggagataattttaaaggaagatagtactaaat 321
Query: 131 ttttttagacattaataagatcttatgatcaaaaatattttgaaatctaaatgaatatac 190
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 ttttttagacattaataagaacttatgattaaaaatattttgaaatctaaatgaatatac 261
Query: 191 actgaagttactatcaataattatttaaactttatattgtaatcattt 238
|||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 260 actgaagttactatcaataattatataaaatttatattgtaatcattt 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 640
Length adjustment: 9
Effective length of query: 229
Effective length of database: 631
Effective search space: 144499
Effective search space used: 144499
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_i11.g1 MSMg01no330_i11.g1 CHROMAT_FILE:
MSMg01no330_i11.g1 PHD_FILE: MSMg01no330_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:15 2005
(292 letters)
>mm_chr1_97607607_97608298
Length = 692
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%)
Strand = Plus / Plus
Query: 1 tggaactaagcattaaagatgagcccaaatatttagttactaggaatttgaaaatctcta 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tggaactaagcattaaagatgagcccaaatatttagttactaggaacttgaaaatctcta 260
Query: 61 ggctaagagcatattcactggttatttggagttttctcacaaaattgtctccattcagga 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ggctaagagcgtattcactggttatttggagttttctcacaaaattgtctccattctgga 320
Query: 121 tatagtcagagagaggagaaagtgctaaatttatgcatgattaggggatgtcagagataa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tatagtcagagagaggagaaagtgctaaatttatgcatgattaggggatgtcagagttaa 380
Query: 181 gatataaacgacaataagaatgttctggaaaattcaggatattgacattagttgctgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatataaacgacaataagaatgttctggaaaattcaggatattgacattagttgctgaat 440
Query: 241 gaagaaccatacaaactctcagaacgatacagcagggaaacacatttc 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagaaccatacaaactctcagaacgatacagcagggaaacacatttc 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
