MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-332F08
Chromosome	1 (Build37)
Map Location	78,892,462 - 79,075,593
singlet/doublet	doublet
Overlap gene	EG545332
Upstream gene	Pax3, LOC100039210, Sgpp2, LOC100039382, Farsb, Mogat1, Acsl3, Utp14b, LOC620521, Kcne4, LOC100039260
Downstream gene	Scg2, Ap1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pax3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18505 MGI:97487
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039210 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	Sgpp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433323 MGI:3589109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039382 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Farsb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23874 MGI:1346035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mogat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68393 MGI:1915643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acsl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74205 MGI:1921455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Utp14b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:195434 MGI:2445092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620521 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 222 ESTs, 5 Proteins pseudo : _no_value

name	Kcne4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57814 MGI:1891125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039260 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039260
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG545332 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545332 MGI:3647375
definition	note : predicted gene, EG545332 pseudo : _no_value

name	Scg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20254 MGI:103033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ap1s3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:252903 MGI:1891304
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdfy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69368 MGI:1916618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69163 MGI:1916413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Serpine2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20720 MGI:101780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433326 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433326 MGI:3646377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 819 ESTs, 26 Proteins

name	LOC665064 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins pseudo : _no_value

name	Pax3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349183 GeneID:18505 MGI:97487
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired box gene 3 transcript_id : NM_008781.3

name	LOC100039210 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234116 GeneID:100039210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : hypothetical protein LOC100039210 transcript_id : XM_001472451.1

name	Sgpp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119709820 GeneID:433323 MGI:3589109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sphingosine-1-phosphate phosphotase 2 transcript_id : NM_001004173.2

name	LOC100039382 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234125 GeneID:100039382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100039382 transcript_id : XM_001473028.1

name	Farsb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362293 GeneID:23874 MGI:1346035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phenylalanyl-tRNA synthetase, beta subunit transcript_id : NM_011811.3

name	Mogat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801941 GeneID:68393 MGI:1915643
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monoacylglycerol O-acyltransferase 1 transcript_id : NM_026713.2

name	Acsl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992919 GeneID:74205 MGI:1921455
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 3 transcript_id : NM_028817.2

name	Acsl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992921 GeneID:74205 MGI:1921455
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 3 transcript_id : NM_001033606.1

name	Utp14b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992942 GeneID:195434 MGI:2445092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) transcript_id : NM_001001981.2

name	Kcne4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946657 GeneID:57814 MGI:1891125
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related subfamily, gene 4 transcript_id : NM_021342.1

name	LOC100039260 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234119 GeneID:100039260
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039260 transcript_id : XM_001472561.1

name	Scg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71361680 GeneID:20254 MGI:103033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secretogranin II transcript_id : NM_009129.2

name	Ap1s3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:35215316 GeneID:252903 MGI:1891304
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex AP-1, sigma 3 transcript_id : NM_183027.1

name	Wdfy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803291 GeneID:69368 MGI:1916618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat and FYVE domain containing 1 transcript_id : NM_027057.2

name	Mrpl44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487074 GeneID:69163 MGI:1916413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L44 transcript_id : NM_001081210.1

name	Serpine2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365346 GeneID:20720 MGI:101780
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine (or cysteine) peptidase inhibitor, clade E, member 2 transcript_id : NM_009255.3

name	EG433326 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234134 GeneID:433326 MGI:3646377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 789 ESTs, 26 Proteins product : predicted gene, EG433326 transcript_id : XM_484885.5

name	Pax3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982139 CCDS:CCDS15082.1 GeneID:18505 MGI:97487
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence IDA] [Evidence IGI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0016566 - specific transcriptional repressor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence TAS] [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0016477 - cell migration [Evidence IMP]; GO:0008283 - cell proliferation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0007507 - heart development [Evidence IMP]; GO:0007517 - muscle development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0048066 - pigmentation during development [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007367 - segment polarity determination [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : paired box gene 3 protein_id : NP_032807.2

name	LOC100039210 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234117 GeneID:100039210
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472501.1

name	Sgpp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921345 CCDS:CCDS15083.1 GeneID:433323 MGI:3589109
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : sphingosine-1-phosphate phosphotase 2 protein_id : NP_001004173.1

name	LOC100039382 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234126 GeneID:100039382
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473078.1

name	Farsb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981400 CCDS:CCDS15084.1 GeneID:23874 MGI:1346035
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA] GO_process : GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : phenylalanine tRNA synthetase alpha; PheRS alpha; phenylalanine-tRNA synthetase-like product : phenylalanine-tRNA synthetase-like, beta subunit protein_id : NP_035941.2

name	Mogat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18426805 CCDS:CCDS15085.1 GeneID:68393 MGI:1915643
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0003846 - 2-acylglycerol O-acyltransferase activity [Evidence IDA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004144 - diacylglycerol O-acyltransferase activity [Evidence IDA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006651 - diacylglycerol biosynthesis [Evidence IDA]; GO:0006071 - glycerol metabolism [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : diacylglycerol O-acyltransferase 2-like; diacylglycerol O-acyltransferase 2-like 1 product : monoacylglycerol O-acyltransferase 1 protein_id : NP_080989.1

name	Utp14b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992943 CCDS:CCDS15086.1 GeneID:195434 MGI:2445092
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : juvenile spermatogonial depletion product : UTP14, U3 small nucleolar ribonucleoprotein, homolog B protein_id : NP_001001981.2

name	Acsl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992922 CCDS:CCDS15087.1 GeneID:74205 MGI:1921455
definition	EC_number : 6.2.1.3 GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : fatty acid Coenzyme A ligase, long chain 3 product : acyl-CoA synthetase long-chain family member 3 protein_id : NP_001028778.1

name	Acsl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992920 CCDS:CCDS15087.1 GeneID:74205 MGI:1921455
definition	EC_number : 6.2.1.3 GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : fatty acid Coenzyme A ligase, long chain 3 product : acyl-CoA synthetase long-chain family member 3 protein_id : NP_083093.2

name	Kcne4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946658 CCDS:CCDS15088.1 GeneID:57814 MGI:1891125
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence ISS] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence ISS]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : minK-related peptide 3 product : potassium voltage-gated channel, Isk-related subfamily, gene 4 protein_id : NP_067317.1

name	LOC100039260 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234120 GeneID:100039260
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472611.1

name	Scg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677865 CCDS:CCDS15089.1 GeneID:20254 MGI:103033
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0042056 - chemoattractant activity [Evidence ISS]; GO:0005125 - cytokine activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IDA]; GO:0006928 - cell motility [Evidence ISS]; GO:0043542 - endothelial cell migration [Evidence ISS]; GO:0048245 - eosinophil chemotaxis [Evidence ISS]; GO:0050930 - induction of positive chemotaxis [Evidence ISS]; GO:0006954 - inflammatory response [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0000165 - MAPKKK cascade [Evidence ISS]; GO:0001937 - negative regulation of endothelial cell proliferation [Evidence ISS] codon_start : 1 product : secretogranin II protein_id : NP_033155.1

name	Ap1s3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:35215317 GeneID:252903 MGI:1891304
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005905 - coated pit [Evidence IEA]; GO:0030662 - coated vesicle membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016563 - transcriptional activator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006897 - endocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : adaptor-related protein complex AP-1, sigma 3 protein_id : NP_898848.1

name	Wdfy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312280 CCDS:CCDS15090.1 GeneID:69368 MGI:1916618
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : WD40 and FYVE domain containing 1 product : WD repeat and FYVE domain containing 1 protein_id : NP_081333.1

name	Mrpl44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487075 GeneID:69163 MGI:1916413
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003725 - double-stranded RNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0004525 - ribonuclease III activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 product : mitochondrial ribosomal protein L44 protein_id : NP_001074679.1

name	Serpine2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678099 CCDS:CCDS15092.1 GeneID:20720 MGI:101780
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 note : serine protease inhibitor 4; protease nexin 1; serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 product : serine (or cysteine) proteinase inhibitor, clade E, member 2 protein_id : NP_033281.1

name	EG433326 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63475897 GeneID:433326 MGI:3646377
definition	codon_start : 1 product : similar to adenine nucleotide translocase protein_id : XP_484885.2

name	(CDS detail)
type	STS
link
xref	UniSTS:128598
definition	standard_name : D1Mit253

name	(CDS detail)
type	STS
link
xref	UniSTS:125811
definition	standard_name : X59358

name	(CDS detail)
type	STS
link
xref	UniSTS:158816
definition	standard_name : X59358

name	(CDS detail)
type	STS
link
xref	UniSTS:144125
definition	standard_name : Pax3

name	(CDS detail)
type	STS
link
xref	UniSTS:128557
definition	standard_name : D1Mit215

name	(CDS detail)
type	STS
link
xref	UniSTS:178418
definition	standard_name : AI594674

name	(CDS detail)
type	STS
link
xref	UniSTS:234158
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162733
definition	standard_name : RH126021

name	(CDS detail)
type	STS
link
xref	UniSTS:224426
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224637
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:91152
definition	standard_name : RH80004

name	(CDS detail)
type	STS
link
xref	UniSTS:479130
definition	standard_name : Hnrpr

name	(CDS detail)
type	STS
link
xref	UniSTS:178417
definition	standard_name : AW487937

name	(CDS detail)
type	STS
link
xref	UniSTS:234160
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:243341
definition	standard_name : Kcne4

name	(CDS detail)
type	STS
link
xref	UniSTS:225312
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:163255
definition	standard_name : X68837

name	(CDS detail)
type	STS
link
xref	UniSTS:144372
definition	standard_name : Scg2

name	(CDS detail)
type	STS
link
xref	UniSTS:243343
definition	standard_name : Scg2

name	(CDS detail)
type	STS
link
xref	UniSTS:207178
definition	standard_name : BE197290

name	(CDS detail)
type	STS
link
xref	UniSTS:207178
definition	standard_name : BE197290

name	(CDS detail)
type	STS
link
xref	UniSTS:234161
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178419
definition	standard_name : AI463302

name	(CDS detail)
type	STS
link
xref	UniSTS:128558
definition	standard_name : D1Mit216

name	(CDS detail)
type	STS
link
xref	UniSTS:122543
definition	standard_name : d9rat53

name	(CDS detail)
type	STS
link
xref	UniSTS:161170
definition	standard_name : RH124348

name	LOC620521 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234118 GeneID:620521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 222 ESTs, 5 Proteins product : similar to Hnrpr protein pseudo : _no_value transcript_id : XR_030753.1

name	LOC665064 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234121 GeneID:665064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins product : hypothetical LOC665064 pseudo : _no_value transcript_id : XR_030825.1

clone name	MSMg01-326O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353C18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-131G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-509O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-332F08.T7 (MSMg01no332_f08.b1)	MSMg01-332F08.TJ (MSMg01no332_f08.g1)
ACC	AG448393	AG448394
length	1,293	1,264
length of high quality (start - end)	498 (136 - 633)	735 (92 - 826)
definition	CHROMAT_FILE: MSMg01no332_f08.b1 PHD_FILE: MSMg01no332_f08.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:18:40 2005	CHROMAT_FILE: MSMg01no332_f08.g1 PHD_FILE: MSMg01no332_f08.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:18:40 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(78,892,462 - 78,892,959)	(79,074,997 - 79,075,593)
sequence	NNNCCCAGTTTTTGNNNNCCAATGGGCGCTAAXXXXXXXXXXXXXXXXXX XXXXCGCGGAATTCAGAAACAACAACCAAACCTACCTCGCCTCCCTAGTT TGNTTGNNANTGGTGTGATAACCTTTAAGATCCCCAGCAACTTAGGAGGA AGGAATTTATTTAATCTTCTAATGAGTCACAGCCCATTGTTGAGGAAGTC AGGAGAGGAAGTCAAACAGGGAATGATCTCAAAACAGAAACCATGAGGAA TACAAGTTGTTGTCTTGCTCAGTTGTTTATTCCCTGACTTATGCTTAGCC AACTTCTTTTTGCAGCTCAGATAGAGCCACTCACAGTTGGCCCAAACCAT GATTTTTGTGAGTATTTGTTTGGTATCCACTTTGCCAGTTAACCTAGAAC TTTCCTGAAATTGGTTGATCTTTAGTGCTTCATCAGGGATTCTTCACGGA GCTTTTAGCAGGTAAGTATATACCTGCAGGTACCTGGAGAAAGACATGAG TACAGGAGTGGCTAGAGGGTCTGATGGAGTGTTTCTGCCATACCCTTTAT TTCCAAAGACTTTCATATGAATGAATTCTTGGTCCAAGCAGTATGTAGTA AAGTCAATATCTTGAAGGGTCGACATCGCCATGTAGGCTCCTGGTTGGAT TAGTGATAACTAAAAATTTCCCACCTCACCTAAATACGTACAGGTAACAA TAGGACTTGCTGAGGATAAATATATTTTCTCAAAATTCATGTATTGAAGC TCTATCTTTCCATGACTCTGCTTGTACATAGGGCCTTTAGGGTGGTAATT AAGATGAAAGGAAACCATTTTAAGTTGGAATCTTCACTTGGTAGCACTGG TGTCCTTATCTGAGGAGAAAGAGACACCAGAATGTTCTTTCTAGGGGAGG CCACGACAGAATTTGGGTGAAGAGCAAAGGGGAACAACCACCAAGAAAGA ATTGTCGGCACCCGGCCTGATGTTCCCTTCTATCCCGACAACCTGGTTGG AAAAAGATTTGAAAAAGAGGGGTGGAAGAGGAAACAAAGAATCCAGCCAA ACATGGTCAAGTGAGGCCAGGTGGGGTTGGAAGTTTAAAAATTTTTGGTT CTGTTCTCTAAAACCCAAAAATCTAATTTTGTGGGCCTTTTAAGACTTTC TTTTTTAAAATTCTGTGGCATCCTAAAAAACCCCCTTTTTTATTTCCGCT ATCCGTCTTTTTTAAAAAACGGCCCCTATTAGGGGGANTTTTTGATAAAA CGTTAAAAAAAGAAGCGATTTTATCTGCNGGGGGAAGGNNNNA	CCAACCTTTNNNNNAAGATGGCTAGCTGGGGCGCCXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXCCTTTAAATCCACTGCTCTGACGAT GTGAAATTGGATAAGTACTGACCCTGCATGAGTCTGTTCTCACAGATGCA AAATAATAATCTATGGCATTAAAAACACACCTAACTTAAAATAACATAAC TTGAAATTAGAGAGTGAAGAAGAAATGGCAACTGTCATTGTTCTATGTGT GATTCTGATCGTTCTTATGGTAAACTGAGTACTAGAATAATGTAATATGT AATAAAAACAATTGTTTTGTTTCATGAGTCATATGATTATAATATCTCCA ACTCTCTTTGTAAGGAATATCTCATAGATAAAATAAAAATCACAATATAT GACAAATATAATATAATAAGAGAACAAAAGTGAAGAAACATCTGTTGCTT TATTACATAATTTTCATCAATTATTTTCTATAAAAGGCAATAAAATTAAA ATTTTTTTAAACCCACAGTCTTCATATTCAAAAGACATTATTCCTCAAGG CAGTTTTTTTAGTACTTCTAAAAATAGAATGTAGTATAAAATATTTTAAA GGCATTGTTGCTCAACTATTAAAACATATCATCTGTTGAGAAATAAACTG AATGTGCATCACTAAACCACATTGCTATTTCATTGAATCTACCCCTTTTA TTTATGCACCACGCACTGTGCATCAATAGCACTCGATATTAATATCACTC GATAATAACATCAGCACAGGTACCATGACAAAACTAATTGTGACTACTTA ATTGTGATTCACTCCCACAATTCACAAAATTAACTGGTATATTAGCATCT GTGTGTGCAACTCTGGGTGAGAGGAAATGCAGTTAAACATTTCTACATGT AAAAGGTTGTGTGTGTGTGACAGGGGCAAGAAGGCAGAGTTAAATTCCTC CCTCTTCTCTTCCTTTTCTCATTTTCTTCTTAATATTATTTCTCTTCCTC TTCTTAATTCTTCTAACATTCAACTTTTCCACCCTCCATTCACTTCCTTC CTCCCTATTTTCTTTCTCCATTTTCAATCTTATATTCTTTCACTATTTAT CCCTACTTTCACATCTATCATTACCTACCACTATCTTTTCCCTTACTCAC TATACCACTCTTACACATCACCTACAAACACACTTCTCCACTCATTCTAT CCCATCCCACCACATTTCTACCATTTCTACTATTCCCTAACCCATTTACT ACTACTCTTCTATA
quality values	Open. Hide. 0 0 0 3 7 6 8 6 6 6 6 6 6 3 0 0 0 0 3 6 6 8 6 8 8 8 12 10 8 8 8 8 8 15 16 24 24 24 16 15 18 18 26 26 42 37 37 37 37 42 42 42 48 50 50 47 43 50 50 50 29 23 14 9 9 23 23 36 33 50 50 50 37 47 44 19 15 6 6 6 6 7 6 6 6 6 6 8 6 6 6 6 7 6 9 9 10 21 23 21 21 3 0 3 25 3 0 0 3 0 3 7 7 9 19 24 25 19 21 9 9 9 8 8 9 8 9 8 8 8 12 15 13 12 10 13 15 25 33 47 33 33 33 33 36 36 57 57 59 59 59 59 59 59 59 53 53 53 53 53 53 47 47 51 51 68 68 47 47 47 47 47 47 68 51 51 51 50 50 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 54 57 57 59 59 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 57 57 54 54 54 59 59 59 68 68 68 59 59 52 52 52 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 52 52 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 52 62 62 62 62 68 68 68 68 68 62 62 62 62 43 39 39 16 21 21 27 43 39 43 62 62 62 62 52 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 43 35 35 43 43 62 62 62 62 62 62 62 62 52 52 45 52 52 62 57 57 59 59 59 59 59 57 57 57 57 57 57 57 52 52 59 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 52 52 52 52 57 52 59 52 52 43 43 37 37 37 44 43 43 43 35 35 35 47 47 52 43 43 35 35 35 43 43 44 46 46 48 59 57 57 57 44 44 33 33 33 36 38 37 37 37 44 37 33 33 35 42 44 48 48 46 57 43 44 42 47 37 37 41 30 34 28 24 24 18 18 18 32 34 47 43 47 31 34 24 24 13 21 21 41 41 39 31 31 25 25 25 37 37 43 43 39 39 28 28 23 19 19 24 24 20 28 24 30 30 32 30 28 28 23 23 23 22 19 11 11 11 19 16 32 28 22 21 12 12 14 28 28 41 30 30 18 15 15 13 21 21 37 37 37 37 37 39 37 37 32 20 22 22 24 12 13 16 18 13 19 13 13 14 28 23 23 34 34 37 37 31 30 30 37 31 25 25 17 17 17 22 26 35 35 39 31 31 28 32 32 24 26 18 18 10 14 9 9 9 12 16 20 32 26 33 30 32 32 36 32 34 28 19 18 11 11 12 17 19 15 15 14 12 12 12 12 13 19 19 20 17 15 14 14 14 23 28 33 37 30 18 22 12 12 11 12 15 24 15 17 19 25 29 23 23 14 25 13 14 14 24 24 28 22 16 16 11 11 9 11 11 15 9 11 12 12 12 12 12 12 12 14 18 17 17 12 22 11 12 12 22 22 37 32 28 19 19 15 17 14 14 17 21 27 14 14 12 23 20 24 24 22 20 12 15 11 11 11 9 9 9 13 13 17 11 11 11 12 11 12 18 17 12 9 9 9 10 9 9 10 9 9 10 12 12 22 13 15 13 15 13 15 12 10 10 10 11 10 10 9 9 9 9 6 6 8 10 8 8 11 12 12 21 11 11 9 9 9 8 8 8 10 8 10 8 8 8 6 8 7 12 9 8 8 10 8 10 10 9 8 8 8 10 10 10 9 6 6 8 10 8 8 8 8 8 8 8 8 8 8 13 7 6 6 6 10 6 8 8 10 10 9 9 9 9 6 6 6 6 8 6 8 8 10 8 8 9 9 11 11 12 13 8 8 7 6 6 6 8 6 8 6 8 8 8 8 8 6 8 7 8 9 8 7 8 7 8 10 8 8 8 8 6 6 10 12 21 7 6 6 6 6 7 8 8 6 7 7 7 7 6 6 6 6 6 8 13 8 8 8 8 8 8 8 17 10 12 9 9 8 8 8 9 8 6 8 8 8 8 8 10 10 8 8 8 8 8 9 10 10 10 10 10 9 9 9 9 10 9 9 11 9 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 6 8 8 8 13 28 26 14 8 8 8 8 8 8 8 8 10 8 6 6 6 6 8 8 8 8 12 8 10 17 16 23 21 11 11 11 11 11 13 12 13 10 13 10 10 10 12 11 10 15 14 11 10 9 7 6 8 6 6 7 6 7 8 8 11 19 19 21 29 21 21 8 8 8 8 6 6 7 7 6 8 8 6 8 6 8 8 9 10 9 8 10 10 10 10 15 15 9 8 8 8 8 8 8 10 10 10 16 16 9 9 9 9 10 13 12 10 8 8 8 9 9 13 19 19 12 17 17 23 16 11 9 9 9 8 8 8 8 8 7 9 9 19 9 9 8 8 8 7 3 0 3 25 25 28 12 9 8 8 8 8 15 6 6 6 6 8 8 7 7 8 15 11 12 12 8 8 8 6 6 8 8 8 8 8 8 8 8 7 7 3 0 3 9 9 7 6 8 7 7 3 0 0 0 0 3	Open. Hide. 7 7 8 6 6 6 6 7 3 0 0 0 0 0 3 8 6 6 6 6 6 6 6 6 8 13 6 6 6 6 8 10 13 8 8 9 8 11 9 13 13 20 20 14 20 21 24 22 19 10 10 15 19 8 10 10 24 24 37 35 35 35 38 53 53 53 44 44 39 42 42 27 27 11 9 11 11 8 8 8 8 8 8 10 15 10 9 9 13 9 12 21 27 28 31 31 31 36 36 36 36 36 36 50 53 43 43 47 47 47 47 47 26 21 10 10 10 13 17 21 15 24 24 36 23 23 12 13 11 17 10 13 24 40 48 50 51 51 50 50 50 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 48 47 47 42 48 42 57 47 47 57 57 57 68 68 59 59 50 50 48 48 47 57 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 57 57 57 57 59 59 68 68 68 57 57 57 57 57 57 57 68 68 57 57 57 57 57 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 59 59 57 57 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 57 39 59 50 57 57 68 57 57 59 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 68 68 57 57 57 68 57 57 59 59 68 68 68 68 59 59 59 59 57 57 57 68 68 57 59 59 59 59 59 59 68 68 68 59 59 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 57 57 57 57 54 47 43 43 57 57 57 57 59 59 59 59 59 59 57 57 57 57 48 48 48 59 59 59 59 59 59 59 59 59 59 59 36 34 24 19 11 11 15 18 28 28 41 41 59 48 48 50 53 53 48 57 57 48 48 59 59 57 57 57 57 57 48 47 59 39 46 46 46 48 48 59 59 59 68 68 68 68 68 68 68 57 57 57 57 57 59 59 68 68 68 68 68 68 59 59 59 57 57 59 59 59 68 68 68 68 68 59 68 68 68 68 68 68 68 59 59 59 59 57 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 52 52 57 59 57 57 59 59 59 59 59 59 59 59 57 57 57 59 59 68 68 59 59 59 57 57 57 57 57 59 57 59 59 59 59 68 68 68 68 68 59 59 59 59 52 52 59 59 59 57 59 59 59 68 68 59 57 57 57 57 57 57 57 57 59 57 57 59 59 68 68 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 57 52 52 57 59 59 59 68 68 68 59 59 59 59 59 59 59 57 57 57 57 57 59 59 59 68 68 59 57 57 57 57 57 57 59 68 68 68 68 57 57 57 57 57 57 57 57 54 54 54 59 59 59 59 57 44 44 48 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 48 48 54 59 59 57 57 57 53 50 50 57 57 57 59 59 59 59 54 48 48 43 42 39 39 39 42 43 43 43 43 57 57 57 59 57 48 48 59 41 41 30 39 37 39 39 41 41 43 43 59 44 41 37 41 43 59 41 46 37 39 30 37 37 25 22 22 24 27 30 43 59 37 37 30 30 37 37 36 41 41 37 37 32 30 29 37 39 37 37 32 29 29 29 32 39 37 23 23 23 23 28 37 44 47 46 43 43 41 28 28 13 12 12 23 21 30 30 34 28 37 31 31 31 32 25 26 24 24 24 29 29 28 22 20 20 10 17 11 11 17 10 18 17 17 16 17 16 19 23 15 26 26 18 21 14 12 18 20 23 26 23 11 12 12 14 12 9 10 18 17 17 21 12 10 10 10 11 12 16 16 10 11 11 11 11 11 23 23 33 15 12 10 10 13 15 23 17 11 11 13 13 15 14 22 16 16 15 15 17 16 12 13 9 9 6 6 8 12 12 19 26 21 19 12 10 10 10 8 8 9 9 9 9 10 10 10 10 9 9 8 8 7 7 7 6 8 9 7 9 9 9 8 8 8 8 8 8 10 9 9 9 9 12 12 15 19 12 12 12 13 13 13 13 13 10 11 8 8 6 6 8 6 6 10 8 8 7 6 8 8 8 9 9 9 13 15 13 10 11 10 10 10 8 8 6 6 8 8 9 12 12 15 10 10 9 9 9 9 11 10 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 10 8 8 6 6 8 8 8 8 8 13 10 10 10 9 9 9 10 10 10 8 8 6 6 8 8 8 8 9 9 10 13 15 12 11 13 11 11 8 10 8 8 8 8 8 9 10 8 8 8 8 8 8 8 8 8 8 6 8 8 8 9 9 10 11 13 17 13 13 10 10 9 10 8 8 8 8 8 9 8 8 8 12 8 10 6 6 6 6 8 8 9 9 10 12 10 10 10 10 10 8 10 8 8 8 7 6 10 8 10 8 8 8 8 13 8 10 9 9 10 8 10 8 8 8 8 8 6 6 8 8 9 10 10 12 9 9 9 9 11 11 11 11 10 11 8 8 8 10 8 8 8 8 8 9 10 12 6 6 8 8 9 10 10 10 13 12 8 8 12 12 10 10 10 9 9 9 12 10 10 10 10 10 12 10 10 9 8 8 8 6 8 8 13 8 8 8 8 10 12 9 9 11 11 16 12 12 12 11 11 11 11 11 11 16 11 9 8 8 6 6 11 8 8 8 8 8 8 9 10 9 9 8 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no332_f08.b1 MSMg01no332_f08.b1 CHROMAT_FILE:
MSMg01no332_f08.b1 PHD_FILE: MSMg01no332_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:40 2005
         (498 letters)



>mm_chr1_78892262_78893159
          Length = 898

 Score =  917 bits (474), Expect = 0.0
 Identities = 492/498 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcaacttaggaggaaggaatttatttaatcttctaatgagtcacagcccattgttgagg 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 agcaacttaggaggaaggaatttatttactcttctaatgagtcacagcccattgttgagg 260

                                                                       
Query: 61  aagtcaggagaggaagtcaaacagggaatgatctcaaaacagaaaccatgaggaatacaa 120
           ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 261 aagtcaggagaggaagtcaaacagggaataatctcaaaacagaaaccatgcggaatacaa 320

                                                                       
Query: 121 gttgttgtcttgctcagttgtttattccctgacttatgcttagccaacttctttttgcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgttgtcttgctcagttgtttattccctgacttatgcttagccaacttctttttgcag 380

                                                                       
Query: 181 ctcagatagagccactcacagttggcccaaaccatgatttttgtgagtatttgtttggta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcagatagagccactcacagttggcccaaaccatgatttttgtgagtatttgtttggta 440

                                                                       
Query: 241 tccactttgccagttaacctagaactttcctgaaattggttgatctttagtgcttcatca 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 tccactttgccagttaacctagaactttcctgaaattggctgatctttagtgcttcatca 500

                                                                       
Query: 301 gggattcttcacggagcttttagcaggtaagtatatacctgcaggtacctggagaaagac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggattcttcacggagcttttagcaggtaagtatatacctgcaggtacctggagaaagac 560

                                                                       
Query: 361 atgagtacaggagtggctagagggtctgatggagtgtttctgccataccctttatttcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgagtacaggagtggctagagggtctgatggagtgtttctgccataccctttatttcca 620

                                                                       
Query: 421 aagactttcatatgaatgaattcttggtccaagcagtatgtagtaaagtcaatatcttga 480
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 aagactttcatatgaatgaattcttggttcaagcagtatgtagtaaagtcaatatcttga 680

                             
Query: 481 agggtcgacatcgccatg 498
           |||||||||| |||||||
Sbjct: 681 agggtcgacaacgccatg 698


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space:   433344
Effective search space used:   433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no332_f08.g1 MSMg01no332_f08.g1 CHROMAT_FILE:
MSMg01no332_f08.g1 PHD_FILE: MSMg01no332_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:40 2005
         (735 letters)



>mm_chr1_79074997_79076131
          Length = 1135

 Score = 1139 bits (589), Expect = 0.0
 Identities = 595/597 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgacgatgtgaaattggataagtactgaccctgcatgagtctgttctcacagatgcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctgacgatgtgaaattggataagtactgaccctgcatgagtctgttctcacagatgcaa 538

                                                                       
Query: 61  aataataatctatggcattaaaaacacacctaacttaaaataacataacttgaaattaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aataataatctatggcattaaaaacacacctaacttaaaataacataacttgaaattaga 478

                                                                       
Query: 121 gagtgaagaagaaatggcaactgtcattgttctatgtgtgattctgatcgttcttatggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gagtgaagaagaaatggcaactgtcattgttctatgtgtgattctgatcgttcttatggt 418

                                                                       
Query: 181 aaactgagtactagaataatgtaatatgtaataaaaacaattgttttgtttcatgagtca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaactgagtactagaataatgtaatatgtaataaaaacaattgttttgtttcatgagtca 358

                                                                       
Query: 241 tatgattataatatctccaactctctttgtaaggaatatctcatagataaaataaaaatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tatgattataatatctccaactctctttgtaaggaatatctcatagataaaataaaaatc 298

                                                                       
Query: 301 acaatatatgacaaatataatataataagagaacaaaagtgaagaaacatctgttgcttt 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acaatatatgacaaatagaatataataagagaacaaaagtgaagaaacatctgttgcttt 238

                                                                       
Query: 361 attacataattttcatcaattattttctataaaaggcaataaaattaaaatttttttaaa 420
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 237 attacataattttcatcaattattttctataaaaggcaataaaattaaaaattttttaaa 178

                                                                       
Query: 421 cccacagtcttcatattcaaaagacattattcctcaaggcagtttttttagtacttctaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cccacagtcttcatattcaaaagacattattcctcaaggcagtttttttagtacttctaa 118

                                                                       
Query: 481 aaatagaatgtagtataaaatattttaaaggcattgttgctcaactattaaaacatatca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 aaatagaatgtagtataaaatattttaaaggcattgttgctcaactattaaaacatatca 58

                                                                    
Query: 541 tctgttgagaaataaactgaatgtgcatcactaaaccacattgctatttcattgaat 597
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  tctgttgagaaataaactgaatgtgcatcactaaaccacattgctatttcattgaat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 735
Length of database: 1135
Length adjustment: 10
Effective length of query: 725
Effective length of database: 1125
Effective search space:   815625
Effective search space used:   815625
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information