BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-332M17.T7 (MSMg01no332_m17.b1) | MSMg01-332M17.TJ (MSMg01no332_m17.g1) |
ACC | AG448728 | AG448729 |
length | 1,255 | 1,278 |
length of high quality (start - end) | 39 (43 - 81) | 608 (129 - 736) |
definition | CHROMAT_FILE: MSMg01no332_m17.b1 PHD_FILE: MSMg01no332_m17.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:19:38 2005 | CHROMAT_FILE: MSMg01no332_m17.g1 PHD_FILE: MSMg01no332_m17.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:19:38 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
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sequence | NNNCCCGACCATTGNNNNCCAATGCGCGCTAAGACTCCTAAGGGAGAGGA
TCCGCGGAATTCTCACCTGAGGAATACCCCCCACCTAAGCACCACTTGAA
AAAATGTTCAACATCCTTAACCTTTAAAAAAATGNAAATNAAAANAANNT
TGAGATTNNANNTNANANNAGTNAGAATGGNTAAGATNAAAAATTNAGGT
GANAGNAGATGGTGGNGTGGATGTGGAGAAAGAGGAANANTNNTNNATTG
TTGGTGGAAGTGNAGGNTTGTANAANNANTNTGGAAATNAGTNTGGNGGT
TNNTNAGAAAANTGGANATAGTANTANNGGAGGATNNAGNAATANNTNTN
NTGGGNATATATNNAGAAGATGNNNNAANAGGTAAGAAGGANANATGGTN
NANTATGTTNATAGTATTTTTATTTATAATAGNNAGAAGNTGGAAAGAAN
NTAGATGNNNNTNAANAGAGGAATGGATANAGAAAATATGGTANATTTAN
ANAATGGAGTANTAATNAGNTATTAAAAAGAATGAATTTATGAAATTNNT
AGGNAAATGGATGGANNTGGAGGGNATNATNNTGAGTGAGGTAANANATT
NANAAAGAAANTNANANAATATGTATTNANTGATAAGTGGATATTAGNNN
NAAANNNAGGATAANNAAGATATAAGATATAATTTGGTAAANANATGAAA
TTNAAGAAGAATGAAGAATGAAGTGTGGANANTATGNNTNTNNTTAGATT
TGGGAAGAAAANANNNATGGAAGGAGTTANGGAGAAAATGTTTGGAGTTG
AGATGAAAAGATGGAANATGTANAGAATGTNATATTTATNGATTTAANNT
ATAATTAGAAATTAAAAGTTGAAAANAATTGTTTATTTTATTAAGAATTT
ATTGAAAGGAANNAAATGTAGTTGTTTTTTTGTGAAATATGTGGGGGGGT
AANAAAAAAAAAAAAGGATGGGTTAAGGTAGGTTATGGATGGATATAAGA
GGGTTNNATGGAGGAATTAGAGAAAGAATTAAAGAGGTTTAGGGAATTGG
GAANNTTAAGGGGGGTGAAATTTTGGAATAAAAAAGAANNTGAAGGTTTG
GATTTAGGGTGTTTTTTTTAAAAAAAAGGTAAANGGGNNTTNTTGGAAGA
AAGGAATTGGAATGTGAATTTTATGTNTNTTAAGGGGAATTTAGGGNAAA
AAGGAAAGGGGGGGAGGAAAGGGGTGGGNTNNNATNNTTNNTGTTNNNNT
NNTNA
| NCGATTCTTTTNNNNNACTCAAGGNAXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTTAAGAGTTCTGCAGAA
GGATCAATGATCCTTAGCTTCCTTTCTGAGTGCAATCTCTCCTGCTTAGA
TTGTTTGTTTATTTCTTTGTTTTGTTTATAGTTTTTGTTTGTTTGGTTGG
TTGGTTGGTTAGATAGAACATAATGCAACCTATTCTATGATCTCTTTTCT
GATTGCTTGAACAGTTCTTTCAGTGATTTTATTCATATGTTCTTTTATTC
TTCCTATATAGCAAATAGGAAGAAAAAGGGCTAGAAATAGGTAATAAAAC
TGACGCATTTCCAAGGTGTCCAGCTTTTTTCTCATCTTGCTGACTGGAGA
CAAACACTTGTTTTTTTATAATAAAAGCCTTGTAGGTTCTTAAATTCCAC
CTGCAGGCTACCTGCTGATCAGTAGGTGCAACAAATACAGGACCTGCTAC
CAGGACACATCATGCAAAGGTTCTGAGCCATTCTACTATTCAAGCTTTCT
TCAAAGTGCCCAACCCCAAACTAGGGGAGAAAAACACTACAGGAGCTTTT
AAAACCCCAGACCAGCCAGGCAGTGATGGCACACTTTAATCCCAGCACTT
GGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA
AAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAA
AACCAAAAAACAAACAAACAAACAAACAAACAAACAACTCAGACCATGAT
AAATGACTAGATATTTTGGCTCTCAGGTTATAGGCACCACCATCCCATCC
CACCCCACTGTGCATGCTATTGTTAATTCAAAAATACAATGAAAAAGTCC
ATGAAGCCCATGACAGTATTTTTTCCTGTTACATATCTCTGTATCACTGA
TATATGCTTTTTTCATATGTAAACAAAAACTAAACCTTATTTCCTAATTT
AAAATTTCCTTCTAAACCTGGGTTTTATTCACCCCCGTTTGTAAGACATA
TTAAATTCCTTGAACTAAATGTCATGTATATAAGCCTTATTGAAAAATCC
CTTGGTTGTCTAATACAATAAAAAATAAAAATCCCCTGTCCCCCTAAAAA
TTTGGCCCATTATTTTTTCTCGCCATTTATTTTTAAAAAGGCACCCTTTT
CCCCACTAATGGTGGCTGTTCCCTCTAATGAAAATTCAAAAACCTTCTTT
TTCTTGGGACATTTTATATAAACTTTTA
|
quality values | Open.Hide. 0 0 0 3 7 6 6 9 9 9 7 7 7 3 0 0 0 0 3 6 6 6 6 6 8 8 10 8 8 8 8 8 8 12 15 9 8 8 8 8 8 12 21 28 23 28 28 28 31 33
37 37 37 37 30 30 30 26 21 22 37 37 37 37 33 33 31 31 31 31 31 31 31 30 29 21 19 9 9 6 6 6 6 8 8 8 8 6 6 6 6 6 8 21 27 30 31 31 31 31
44 59 59 57 57 38 38 36 36 41 31 33 33 33 33 29 21 15 9 9 9 13 11 15 11 11 9 9 12 15 25 23 27 3 0 3 23 23 3 0 3 27 27 3 0 3 3 0 0 3
7 7 24 32 23 25 3 0 0 3 0 0 3 0 3 0 3 0 0 3 21 3 0 3 25 27 44 27 27 3 0 3 21 21 23 27 3 0 3 27 29 59 27 25 3 0 3 22 25 25
25 3 0 3 3 0 3 25 17 9 9 9 7 14 3 0 3 25 25 39 41 47 50 50 50 50 53 50 59 59 59 59 59 59 29 29 3 0 3 0 3 0 0 3 0 0 3 23 23 37
37 37 50 59 59 59 59 59 59 29 27 3 0 3 29 3 0 3 23 23 23 3 0 3 3 0 0 3 0 3 0 3 29 29 59 29 27 3 0 3 27 3 0 3 27 3 0 3 27 29
3 0 0 3 0 3 23 27 27 27 3 0 3 27 27 3 0 3 25 27 27 27 3 0 3 3 0 0 3 21 19 33 19 23 3 0 0 3 3 0 3 29 27 3 0 0 3 0 3 0
0 3 29 29 3 0 3 29 27 27 27 3 0 0 3 27 25 37 37 18 23 3 0 0 0 0 3 3 0 3 27 27 44 59 59 41 41 41 25 25 3 0 3 0 3 7 7 7 3 0
0 3 0 3 25 25 23 25 3 0 3 23 13 10 10 10 10 10 10 11 25 23 41 41 41 47 47 47 59 27 23 3 0 0 3 23 27 23 3 0 3 27 27 44 47 44 27 27 3 0
0 3 20 20 20 25 3 0 0 0 0 3 0 3 3 0 3 23 18 30 30 39 39 42 41 39 25 25 3 0 3 22 27 59 59 59 59 59 59 59 23 23 3 0 3 9 9 9 3 0
3 0 3 22 23 37 37 37 19 19 3 0 3 7 7 3 0 3 3 0 3 27 27 59 47 47 59 59 48 48 48 43 43 48 48 48 48 48 48 59 47 47 47 47 27 27 3 0 0 3
20 20 3 0 3 25 25 41 41 47 41 44 25 27 3 0 0 3 23 23 37 19 19 3 0 3 3 0 3 3 0 0 3 25 18 30 30 37 34 39 36 23 23 3 0 3 0 3 23 3
0 3 0 3 22 27 39 25 27 3 0 3 0 3 0 3 0 3 22 27 47 47 41 41 23 27 3 0 3 0 3 23 22 32 34 34 37 39 39 39 39 40 41 34 23 18 3 0 0 0
0 3 17 3 0 0 0 3 18 23 14 7 7 3 0 0 3 16 25 17 22 22 25 25 24 30 13 19 19 34 34 39 39 21 18 10 10 10 18 25 3 0 3 0 3 18 23 18 15 7
7 3 0 3 11 23 25 25 21 17 19 22 24 21 9 9 9 9 9 15 18 24 28 28 13 13 12 15 3 0 3 0 3 23 23 3 0 0 3 0 3 0 0 3 14 11 11 11 12 12
27 28 32 7 7 6 6 6 7 17 3 0 3 0 0 0 3 12 13 15 21 24 20 20 25 30 14 14 3 0 3 11 8 6 6 9 9 9 12 25 20 20 24 16 9 11 9 9 7 7
8 11 10 15 15 19 23 18 13 17 11 11 9 8 8 3 0 3 16 16 12 3 0 3 10 10 8 13 7 3 0 3 8 10 8 6 6 6 3 0 3 8 8 7 7 7 3 0 0 3
9 9 10 9 9 9 10 9 9 7 9 7 7 7 8 8 9 9 7 7 6 9 8 8 3 0 3 6 6 8 9 9 10 9 9 9 9 9 9 9 9 10 10 9 9 10 11 10 15 11
11 11 9 9 9 11 12 11 11 11 3 0 0 3 9 9 9 9 9 8 8 6 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 9 9 9 9 9 15 7 7 6 6 6
8 3 0 3 6 8 8 8 8 8 8 8 15 8 8 8 8 7 7 6 6 6 6 7 6 6 6 6 6 6 7 7 7 8 9 13 9 11 9 9 9 6 6 6 6 6 8 8 6 6
6 6 9 9 3 0 0 3 8 8 8 8 8 8 8 8 8 8 8 10 9 9 9 9 9 9 13 9 6 6 6 6 6 8 10 7 8 9 9 9 9 9 12 13 9 9 9 9 7 6
6 6 3 0 0 3 11 9 9 9 9 14 15 8 8 7 7 6 8 11 9 8 9 8 8 10 10 9 9 9 11 8 8 6 6 6 8 3 0 0 3 6 6 6 6 6 6 10 10 10
9 12 9 11 9 9 6 6 6 6 6 6 9 12 12 28 22 25 17 17 17 31 19 19 15 11 8 8 6 6 8 8 3 0 3 9 3 0 0 3 3 0 3 6 8 8 8 6 6 6
8 11 11 9 9 7 8 8 8 8 8 7 8 6 6 6 7 10 7 7 6 6 6 6 7 3 0 3 0 3 6 6 6 8 8 8 10 9 10 10 10 8 8 8 8 3 0 3 11 12
13 10 10 9 8 11 7 7 7 6 6 6 9 15 8 9 6 12 8 8 11 19 17 6 6 6 7 3 0 3 0 0 0 3 3 0 0 3 3 0 0 3 13 15 3 0 0 0 0 3
0 0 3 0 3 | Open.Hide. 0 3 7 7 8 11 11 9 10 22 3 0 0 0 0 0 3 6 6 6 6 6 6 3 0 3 3 0 3 6 6 6 6 13 10 9 6 6 6 6 8 7 9 18 19 17 17 8 10 10
21 19 12 12 19 24 35 35 35 37 37 37 29 28 28 28 35 36 36 41 41 50 50 42 37 27 27 9 9 9 9 12 12 17 14 12 8 6 6 6 8 17 19 29 29 39 42 44 44 53
47 50 50 57 57 57 57 57 53 53 50 50 36 36 31 31 23 22 13 19 9 10 8 8 9 10 10 14 10 23 26 33 33 48 33 33 33 38 38 50 53 53 50 50 42 47 47 36 47 47
57 57 57 57 68 68 68 51 51 51 51 51 47 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 57 48 48 48 48 48 59 59 68 68 59 59 57 57
57 57 57 68 68 68 68 68 68 57 59 59 59 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 57 53 53 53 53
53 50 50 59 59 59 59 31 30 19 15 15 15 17 28 35 30 47 46 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 54
57 59 59 59 68 59 59 46 43 54 54 57 57 54 57 57 68 57 57 57 57 59 59 59 59 48 57 57 59 59 68 59 59 57 57 59 59 57 57 57 57 57 57 57 57 57 57 57 57 59
59 57 57 57 57 57 57 59 59 59 59 59 59 59 68 68 68 68 68 59 59 54 57 57 59 52 59 59 68 68 68 68 59 59 59 59 59 59 59 59 68 68 68 68 68 59 59 59 68 59
59 59 57 59 59 68 59 59 54 54 54 59 59 59 59 47 43 43 59 47 57 57 59 57 57 57 57 57 57 57 57 57 59 59 57 43 43 43 59 47 54 57 57 57 54 54 57 59 59 68
68 57 46 46 43 43 42 42 42 43 30 42 37 42 40 30 33 32 59 59 59 59 57 50 50 50 48 48 48 48 37 37 37 39 41 43 39 39 39 30 39 47 47 37 47 47 43 43 39 41
41 48 48 48 48 48 57 57 43 43 43 57 57 59 59 57 43 43 40 40 40 43 48 48 37 43 28 30 30 37 32 39 47 59 48 47 46 34 34 25 26 28 12 12 14 21 24 30 32 36
41 59 46 41 41 41 39 32 27 32 30 37 37 37 37 37 35 35 35 32 32 33 22 19 12 12 24 19 19 28 26 34 28 24 18 17 11 11 12 22 19 20 22 18 14 12 9 9 9 9
10 17 19 30 32 33 33 33 33 28 28 35 33 30 19 19 15 18 14 18 18 19 11 11 11 21 21 40 39 44 44 44 37 31 34 22 15 21 21 18 11 12 12 25 25 33 30 29 23 14
11 9 9 9 19 12 12 11 17 17 28 31 21 21 11 11 11 12 12 24 22 30 19 14 9 9 9 19 21 18 19 12 10 10 19 20 21 15 20 22 22 17 16 11 11 11 20 18 27 29
39 25 29 15 15 15 17 18 18 19 19 16 17 17 22 13 13 14 17 12 13 15 18 17 15 16 19 21 20 22 32 30 30 35 23 26 17 17 13 22 18 15 9 16 16 8 11 8 8 8
8 8 15 11 8 10 9 9 21 25 19 20 12 11 11 8 8 8 9 9 13 22 28 37 31 29 30 13 9 8 10 8 9 11 15 21 23 28 21 22 15 10 10 10 10 10 11 18 18 11
12 12 15 16 24 15 15 16 18 19 17 8 8 8 10 10 14 14 9 10 8 15 9 9 9 19 27 27 17 11 11 9 9 13 9 8 8 12 12 12 19 19 19 12 11 9 9 8 8 8
8 8 11 11 9 10 10 12 10 8 8 8 8 8 9 9 9 10 10 9 9 12 13 8 8 8 8 8 13 11 15 22 20 21 23 10 10 10 10 10 9 8 8 6 6 6 6 8 6 6
6 8 6 9 12 12 9 9 9 8 9 9 9 9 9 9 17 10 8 8 8 8 6 6 8 8 6 7 6 8 8 8 10 16 19 10 10 11 8 9 8 8 8 10 16 13 10 10 9 12
19 17 16 8 8 8 10 10 8 8 8 8 8 8 8 6 8 8 8 10 8 12 13 9 9 9 9 12 15 13 8 8 8 8 10 8 8 8 8 8 8 10 14 13 12 10 10 13 19 20
10 10 9 9 8 10 13 10 11 8 10 10 12 13 10 9 12 11 12 10 8 8 8 13 10 8 11 6 6 6 8 8 8 8 8 12 10 8 6 6 6 6 10 8 8 10 15 14 13 13
10 8 8 6 6 8 8 8 10 8 6 6 6 8 8 11 11 10 10 15 15 22 15 12 12 8 8 7 6 10 10 18 10 9 9 9 9 9 9 8 8 13 13 10 10 11 15 13 15 10
8 10 9 9 9 8 8 6 6 8 6 6 8 8 8 8 10 10 8 8 8 8 8 10 12 12 8 8 |