Query= MSMg01no333_a16.b1 MSMg01no333_a16.b1 CHROMAT_FILE:
MSMg01no333_a16.b1 PHD_FILE: MSMg01no333_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:07 2005
(153 letters)
>mm_chr1_191904968_191905520
Length = 553
Score = 255 bits (132), Expect = 7e-73
Identities = 144/148 (97%)
Strand = Plus / Plus
Query: 6 gaattctcctggctcacaatcagctcccaaggatgtaagcctgtttgctgtttaataagc 65
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctcctggcccagaatcagctcccaaggatgtaagcctgtttgctgtttaataagc 265
Query: 66 tctgttaacattccatctttctgtttgcttcacacacacagcacttctttgaagcccaga 125
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 266 tctgttaacattctatctttctatttgcttcacacacacagcacttctttgaagcccaga 325
Query: 126 cagcctgggacaaggtacagatagatgg 153
||||||||||||||||||||||||||||
Sbjct: 326 cagcctgggacaaggtacagatagatgg 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no333_a16.g1 MSMg01no333_a16.g1 CHROMAT_FILE:
MSMg01no333_a16.g1 PHD_FILE: MSMg01no333_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:07 2005
(344 letters)
>mm_chr1_192070910_192071651
Length = 742
Score = 592 bits (306), Expect = e-173
Identities = 334/344 (97%), Gaps = 2/344 (0%)
Strand = Plus / Minus
Query: 1 ctccctcagccccatcccaggaagcgggaaaaatctccccaggcagcaggacatcctcag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 542 ctccctcagccccatcccaggaagcgggaaaaatctctccaggcagcaggatatcctcag 483
Query: 61 caagttctaaatgcacctgtctttcactttactcagccctctaccacccgttgccctatg 120
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||
Sbjct: 482 caagttctaaatgcacctgtctttcactttactcagctctctaccactcgttgccctgtg 423
Query: 121 agccttaaaagattcagcccctgtttcagtgtgagctgttctggctattttttttttcca 180
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 422 agccttaaaagattcagtccctgtttcagtgtgagctgttctggctattttttttt--ca 365
Query: 181 ttcatacacagctagccattatcaaaatatcggagtgagcaacccaaaagacgtctattt 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 364 ttcatacacagctagccattatcaaaatatctgagtgagcaacccaaaagacgtctattt 305
Query: 241 tagcttgtaacttctgaggtctgtctacatggttagccacactgggtttctatcctcccc 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tagcttgtaacttctaaggtctgtctacatggttagccacactgggtttctatcctcccc 245
Query: 301 tgctgagatgggagattgtcctggtagtaagagcacgtggggaa 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgctgagatgggagattgtcctggtagtaagagcacgtggggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 742
Length adjustment: 9
Effective length of query: 335
Effective length of database: 733
Effective search space: 245555
Effective search space used: 245555
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
