Query= MSMg01no333_c17.b1 MSMg01no333_c17.b1 CHROMAT_FILE:
MSMg01no333_c17.b1 PHD_FILE: MSMg01no333_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:17 2005
(365 letters)
>mm_chr1_20658749_20659512
Length = 764
Score = 588 bits (304), Expect = e-172
Identities = 350/366 (95%), Gaps = 4/366 (1%)
Strand = Plus / Plus
Query: 2 ggaattctcagtattgtgccttccagacatactgaaaactataaagtagctgggtggtag 61
|||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ggaattctcagtattgcgcattccagacatactgaaaactataaagtggctgggtggtag 260
Query: 62 tggtgcatgccttttatcccagcacttaaaagacagaggtaggtggatctttgagtttga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtgcatgccttttatcccagcacttaaaagacagaggtaggtggatctttgagtttga 320
Query: 122 gaacagtctggtgtacagaatgagttccaggatagtcaaggctagacagacaagccctat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gaacagtctggtgtacagaatgagttccaggatagtcaaggctagacagacaaaccctat 380
Query: 182 ctcacaaatccaaatatccataagtatatgtatgtgtatgtgtatatatgtgtgtgt--t 239
||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||| |
Sbjct: 381 ctcacaaatccaaatatacatatgtatatgtatgtatatgtgtatatatgtgtgtgtgtt 440
Query: 240 tatattgtatgaataatatattatttctatcatatatcatataaaatgcatacatatttt 299
|||||| || | ||||||||||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 441 tatattata-gtataatatattatttc-atcatataacatatacaatgcatacatatttt 498
Query: 300 cataggtatatcatataaaattgcctgctttctaggaactcttaaaaacttggcatctcc 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 499 cataggtatatcatataaaattgcctgctttctaggaactcttaaagacttggcatctcc 558
Query: 360 taccat 365
||||||
Sbjct: 559 taccat 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 764
Length adjustment: 9
Effective length of query: 356
Effective length of database: 755
Effective search space: 268780
Effective search space used: 268780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_c17.g1 MSMg01no333_c17.g1 CHROMAT_FILE:
MSMg01no333_c17.g1 PHD_FILE: MSMg01no333_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:17 2005
(349 letters)
>mm_chr1_20825701_20826449
Length = 749
Score = 632 bits (327), Expect = 0.0
Identities = 345/355 (97%), Gaps = 8/355 (2%)
Strand = Plus / Minus
Query: 1 cttgacctgtccctaaactaaaaatcctgattaaagttaccttaatcccaagagtttaa- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 615 cttgacctgtccctaaactaaaaatcctgattaaagttaccttaatcccaagagttcaag 556
Query: 60 ------a-gtgaatcccgggccagacagttctacatgagaacgtgtctcaagaaacaaac 112
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtcacgatgtgaatccccggccagacagttctacatgagaacgtgtctcaagaaacaaac 496
Query: 113 aaaaatcaaatcctcaaataaaataagtcttaaagttactgcaaaaaggtaaccaaagga 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaaaatcaaatcctcaaataaaataagtcttaaagttactgcaaaaaggtaaccaaagga 436
Query: 173 ggcttggggaaggaatgaagtgggaatgagggcatggagattccaagggtgtttgagggc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggcttggggaaggaatgaagtgggaatgagggcatggagattccaagggtgtttgagggc 376
Query: 233 agctgtggggaatactccaggattcgcctgtggttgaggtgtagtgtgtccttgagtcta 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agctgtggggaatactccaggattcgcctgtggttgaggtgtagtgtgtccttgagtcta 316
Query: 293 taggtgtggctgctgggcatccaaggatgttggatgctgcagtgggagcctcgca 347
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 taggtgtggctgctgggcatccaaggatgttggatgctgcagtgggagcctcgca 261
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
