Query= MSMg01no334_c17.b1 MSMg01no334_c17.b1 CHROMAT_FILE:
MSMg01no334_c17.b1 PHD_FILE: MSMg01no334_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:31 2005
(634 letters)
>mm_chr1_186740854_186741887
Length = 1034
Score = 1139 bits (589), Expect = 0.0
Identities = 623/635 (98%), Gaps = 4/635 (0%)
Strand = Plus / Plus
Query: 1 caagtggctcacaaccatctatgactccagttctaggggatccagtgctggctaccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagtggctcacaaccatctatgactccagttctaggggatccagtgctggctaccatgg 260
Query: 61 gtaccaggcaagcacatgatgcagagacatccatgcaagcaaaacacacacataaacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaccaggcaagcacatgatgcagagacatccatgcaagcaaaacacacacataaacata 320
Query: 121 aaatttttaaaattacatagaataaaaatgaagttgcagctgcatctgctgccatccggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatttttaaaattacatagaataaaaatgaagttgcagctgcatctgctgccatccggg 380
Query: 181 ccctgccatctgggtcccggtctcacggggcactttggagagcagataggcacatgtata 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 ccctgccatctgggtcccggtctcacggggcactttggagagcagataggtacatgtata 440
Query: 241 agctgaggtattctggccttagccactgtcctatcttcctgtgggggtttgaataggtgt 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 agctgaggtagcctggccttagccactgtcctatcttcctgtgggggtttgaatagatgt 500
Query: 301 ggcctccacagacccatgtgtttgaatgtgtgtccatagggagtggcactgttaggaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcctccacagacccatgtgtttgaatgtgtgtccatagggagtggcactgttaggaggt 560
Query: 361 atggccttg-ttggagtaggttgtgtgtcactttggaggtggactctcctcaagctacat 419
||||||| | ||| | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggcctaggttg-a--aggaagtgtgtcactttggaggtggactctcctcaagctacat 617
Query: 420 ctagagtgagaaagtccctttctaccattcttcccaccatgataatggactgaacctctg 479
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctaaagtgagaaagtccctttctaccattcttcccaccatgataatggactgaacctctg 677
Query: 480 aactggtaagccagccccaattaaatgttttcctttataagggttgccatggtcatggta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aactggtaagccagccccaattaaatgttttcctttataagggttgccatggtcatggta 737
Query: 540 tttcttcacaatgctgtctgaagcaatgaccctgcagcccttggctatgggcatctacaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tttcttcacaatgctgtctgaagcaatgaccctgcagcccttggctatgggcatctacaa 797
Query: 600 gggccacagagtgacaatgacggggaggggctgag 634
|||||||||||||||||||||||||||||||||||
Sbjct: 798 gggccacagagtgacaatgacggggaggggctgag 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_c17.g1 MSMg01no334_c17.g1 CHROMAT_FILE:
MSMg01no334_c17.g1 PHD_FILE: MSMg01no334_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:31 2005
(664 letters)
>mm_chr1_186871112_186872174
Length = 1063
Score = 1214 bits (628), Expect = 0.0
Identities = 655/664 (98%), Gaps = 1/664 (0%)
Strand = Plus / Minus
Query: 1 tccatggttgggaaacagcaacttcgaagtttcctttcttaaagaaaaccgggcctgacc 60
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 863 tccatggttgggaaacagcaacttcaaagtttcctttcttaaagaaaactgggcctgacc 804
Query: 61 tttcactgactgcgatggaggctgggctgcagaagttctggataaacatccccatgtcct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 803 tttcactgactgcgatggaggctgggctgcagaagttctggataaacatccccacgtcct 744
Query: 121 ggcatgagccagtgtcgccttctctctctctccccctgccataggggatgctggatctag 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 743 ggcatgagccagtgtcgccttctctctctctccccctgccgtaggggatgctggatctag 684
Query: 181 aggagactggagagggaggattgacgcatctgtttccacagcagccttatgggttccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aggagactggagagggaggattgacgcatctgtttccacagcagccttatgggttccaga 624
Query: 241 gctcaggcctattacataggacagggagcatacatgctgcgtattaaattcttgctggga 300
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gctcaggccca-gacataggacagggagcatacatgctgcgtattaaattcttgctggga 565
Query: 301 tggggctcctgggggaggggaagcagagggacagataacagagccccagaatggatgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggggctcctgggggaggggaagcagagggacagataacagagccccagaatggatgttt 505
Query: 361 ccaaggaaagctggctctgcctgttgacatcacctctgccactggtaacaggtctgtcta 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 504 ccaaggaaagctggctctgcctgttgacgtcacctctgccactggtaacaggtctgtcta 445
Query: 421 gagagagagagtaaacagaggggtcctggcagaatgctccccatcattcagattttgcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagagagagagtaaacagaggggtcctggcagaatgctccccatcattcagattttgcaa 385
Query: 481 aatgctcctctaggtgtcggagtctgacaggaaacttactgctgtcactgtagagccatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatgctcctctaggtgtcggagtctgacaggaaacttactgctgtcactgtagagccatt 325
Query: 541 aatggtccacggctggatttgccatgcagccgtctgctctgcggcctcctgtgtttaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatggtccacggctggatttgccatgcagccgtctgctctgcggcctcctgtgtttaact 265
Query: 601 gtgacacatcggaagcaagatgcctgaagagtatgctgagtgcaaatgtccctaattatg 660
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 gtgacacatcggaagcaagatgcctgaagagtatgctgagtgaaaatgtccctaattatg 205
Query: 661 aatg 664
||||
Sbjct: 204 aatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1063
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1053
Effective search space: 688662
Effective search space used: 688662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
