TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCATGAGGATCCGCGG
AATTCATTCATTTCCATGAATTTGTTTTCTGTTGCTTTATGGTGACTTGA
AAATATTGAATATTGGGAGAGAGAATCCCATGATGTTTAATGGATTATGC
TCAGTGCTCCAATCCAGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTCCCTCACCTTCTTTTTTTCTTCTTTTTTTC
CTCCTCTTTCCCCTTCCGCCTTCCCTTGTTTCTTTCTCCCTTATTCCCCT
TTCCCACTTTTTTTTTTTTCACTTCTACTTCTATTTTCTTTTTTATTTCC
CTTTTTTCTTTCCTCCCCTCTTTCTCTATTTTTTCACATCTCTCTTTTTC
CTTAATATTATTTCTTCATCCATTTTTTATTTAAATATTTTCTCTTTTTC
TCCCCCCGTATTTCCCACTTTTTATACTATTCCCTTTCTTCCCTTCCTTT
TCCCCTTACTTTTTTTTTCTTTTTTCCCCCCTTCCCTTCTTCTCTATTTA
TCATTTTTCACCTTCTTACTACCCTATCCCTCCCTACTTCTCTTTGTTTT
TTTTTTTGTTTTTTTCTCCCCCCCCTCTTTCCTTTTATTTTCCCATCCCT
TTGTTTCCTCTTTTTTTTATCCTTTTTCGCCTTTTCTTTCATTTCTTCCC
TTCTTTTTCCCCTTTTCCTTTTTAAGTAATTCACCTTCCCCTCTTCTCCT
CTCACTTTCTTTTTCTTCCCACTCTCTCCCCTCCCCTCTTATTTACCCTT
CAACTTCCCCCCTATTTCTTTACCCACCTTTT

TCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCCATCTGTCCTATTACTGTTTAGT
GTAGAGACTAGGTTCTATGTGGTGGTTTGCATGAACATGCATCACATAGA
TGTGTACAATTTCATGCTTAGTCCCTAGTTGATGAGTTTTCTTTTCTTTT
TTTTCTTTTAGATATTTTCTTCATTTACATTTCAAATGCTATCCCCAAAG
TCCCCCAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTACT
GGGGCATATAATCTTCACTAGACCAAGGGCCTCTCCTCCCATGATGGTCT
ACTAGGCCATCCTCTGCTACATATGCAACTAGAGACGCAAGCTCTGGGGG
GTACCGGTTAGTTCATATTGTTGTTCCACCTATATGGTTGCAGACCACTT
TGGTGCCTTGGGTACTTTCTCTAGCTCCTTCATTGGAGACCCTGTGTTCC
ATCCAATAGCTGACTGTGAGTGTCTACTTCTGTATTTGCCAGGTACTGGC
ATAGCCTCTCAAGAGACAGCTGTCCTGTCAGTAAAATATTGCTGTACTAC
CTTATCTTATGAGACATTAATATATTCTTCCAGCCTAACGCCACTTTATC
CTTTCCTATTAATTTAACATATCCCCGTTAGTCACCTTTCCACTATAACC
ATTTGAACATGTTTGTG

Query= MSMg01no334_d16.g1 MSMg01no334_d16.g1 CHROMAT_FILE:
MSMg01no334_d16.g1 PHD_FILE: MSMg01no334_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:35 2005
         (478 letters)



>mm_chr1_69083462_69084339
          Length = 878

 Score =  893 bits (462), Expect = 0.0
 Identities = 474/478 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccatctgtcctattactgtttagtgtagagactaggttctatgtggtggtttgcatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccatctgtcctattactgtttagtgtagagactaggttctatgtggtggtttgcatgaa 260

                                                                       
Query: 61  catgcatcacatagatgtgtacaatttcatgcttagtccctagttgatgagttttctttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgcatcacatagatgtgtacaatttcatgcttagtccctagttgatgagttttctttt 320

                                                                       
Query: 121 cttttttttcttttagatattttcttcatttacatttcaaatgctatccccaaagtcccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttttttcttttagatattttcttcatttacatttcaaatgctatccccaaagtcccc 380

                                                                       
Query: 181 caacccacccactcctgcttcctggccctggcattcccctgtactggggcatataatctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caacccacccactcctgcttcctggccctggcattcccctgtactggggcatataatctt 440

                                                                       
Query: 241 cactagaccaagggcctctcctcccatgatggtctactaggccatcctctgctacatatg 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacaagaccaagggcctctcctcccatgatggtctactaggccatcctctgctacatatg 500

                                                                       
Query: 301 caactagagacgcaagctctggggggtaccggttagttcatattgttgttccacctatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 501 caactagagacgcaagctctggggggtaccggttagttcatattgttgttccacctatag 560

                                                                       
Query: 361 ggttgcagaccactttggtgccttgggtactttctctagctccttcattggagaccctgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttgcagaccactttggtgccttgggtactttctctagctccttcattggagaccctgt 620

                                                                     
Query: 421 gttccatccaatagctgactgtgagtgtctacttctgtatttgccaggtactggcata 478
           ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 621 gttccatccaatagctgactgtgagtgtccacttctgtatttgccaggcactggcata 678


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space:   406224
Effective search space used:   406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)