Query= MSMg01no334_g08.b1 MSMg01no334_g08.b1 CHROMAT_FILE:
MSMg01no334_g08.b1 PHD_FILE: MSMg01no334_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:48 2005
(537 letters)
>mm_chr1_146717869_146718805
Length = 937
Score = 986 bits (510), Expect = 0.0
Identities = 531/540 (98%), Gaps = 6/540 (1%)
Strand = Plus / Minus
Query: 1 ctgtgtgtaatgcttgg-aaaaaaaaaagatttttttccataaccgctaggaagccagat 59
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ctgtgtgtaatgcttggaaaaaaaaaaagatttttttccataaccgctaggaagccagat 678
Query: 60 tatggatcaaaatatatacatttttttatcacagcctgaaggtaatgtagacatttcaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tatggatcaaaatatatacatttttttatcacagcctgaaggtaatgtagacatttcaaa 618
Query: 120 gattaagagaacaaattcagtcacacctgttgatgtaattgagtctatctatatcccctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gattaagagaacaaattcagtcacacctgttgatgtaattgagtctatctatatcccctg 558
Query: 180 acggttcacatagatgttgtagctattcaagaattgtgatgcagcttattactgctctgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 acggttcacatagatgttgtagctattcaagaattgtgatgcagcttattactgctctgt 498
Query: 240 gaaaacat--tattttgctcaagcatactttcctttcaccatgttttcagtatgtatgca 297
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaaaacatgaaa---tgctcaagcatactttcctttcaccatgttttcagtatgtatgca 441
Query: 298 gaatagtgatcagaaccatgggtgtggaagcaagttaaggtacatccagattcagagagg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaatagtgatcagaaccatgggtgtggaagcaagttaaggtacatccagattcagagagg 381
Query: 358 ctgctaagctgcactttcacactcatatgttggcccaggaaggcactgccattcagccta 417
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 ctgctaagctgcactttcacactcatatgttggcccaggaaggcactgtcattcagccta 321
Query: 418 ggatatttatataatggtgacatggtgaagagtctgctactaaaacaaacacagtggcat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggatatttatataatggtgacatggtgaagagtctgctactaaaacaaacacagtggcat 261
Query: 478 tccactatcaccctgggagaaattgagtatgaaagtgttttctaatgatccaggaaaatc 537
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 260 tccactatcaccctgggagaaattgagtatgaaaatgttttctaatgatccaggaaaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_g08.g1 MSMg01no334_g08.g1 CHROMAT_FILE:
MSMg01no334_g08.g1 PHD_FILE: MSMg01no334_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:48 2005
(593 letters)
>mm_chr1_146528290_146529282
Length = 993
Score = 1112 bits (575), Expect = 0.0
Identities = 591/601 (98%), Gaps = 8/601 (1%)
Strand = Plus / Plus
Query: 1 atagaccaatgtacattaggaacatagctattatctcaattctcagtaaaattcttacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atagaccaatgtacattaggaacatagctattatctcaattctcagtaaaattcttacaa 252
Query: 61 agcaaattcaagaacatatcaaagtgtttttccatcatgatcaaggtgacttcaaccacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agcaaattcaagaacatatcaaagtgtttttccatcatgatcaaggtgacttcaaccacg 312
Query: 121 aaatgcaaggatgattcaacatacataatccatcacataaacatactaaaagataaaact 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaatgcaaggatgattcaacatacataatccatcacataaacatactaaaagataaaacg 372
Query: 181 cacattatcatctcattagatgaagaaagggcctttgacaaaatccaaccttgctttatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cacattatcatctcattagatgaagaaagggcctttgacaaaatccaaccttgctttatg 432
Query: 241 acaaaagtcctggagagcctagggatacaagtgacatatcaacatgattaaagcaatctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acaaaagtcctggagagcctagggatacaagtgacatatcaacatgattaaagcaatctt 492
Query: 301 ccctgcttttcattcagagataacagttccagtgataattatgtacaggaaaaatgacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccctgcttttcattcagagataacagttccagtgataattatgtacaggaaaaatgacaa 552
Query: 361 tgaggacagatctttctcaatgtgacatgcatttttctccagacacaatggaattctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgaggacagatctttctcaatgtgacatgcatttttctccagacacaatggaattctaaa 612
Query: 421 aaaaaaaaaaa--------tcaacaacaaactatagttaactctttcaactacactactt 472
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaaaaaaaaaaaaaaaaaatcaacaacaaactatagttaactctttcaactacactactt 672
Query: 473 tgggcaaaatatgtggaacatgtatcctttctaaatatgagacatgattaaaatttacat 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgggcaaaatatgtggaacatgtatcctttctaaatatgagacatgattaaaatttacat 732
Query: 533 taaaaattaggtgaaccactgacttcctaagtacattgataaaaggcattaaagatcaca 592
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 733 taaaaattaggtgaaccactgacttcctaaatacattgataaaaggcattaaagatcaca 792
Query: 593 a 593
|
Sbjct: 793 a 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
