Query= MSMg01no335_c14.b1 MSMg01no335_c14.b1 CHROMAT_FILE:
MSMg01no335_c14.b1 PHD_FILE: MSMg01no335_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:49 2005
(444 letters)
>mm_chr1_71631608_71632452
Length = 845
Score = 756 bits (391), Expect = 0.0
Identities = 406/411 (98%), Gaps = 1/411 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagtatatttctggttggtgattatttttataagcacatgccaacgctttacta 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggaattcagtataattatggttggtgattatttttataagcacatgccaacgctttacta 531
Query: 64 ctgtggaaagacaagtgttttaataaaaagatttacattccatgatgtggacgtcatttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctgtggaaagacaagtgttttaataaaaagatttacattccatgatgtggacgtcatttc 471
Query: 124 -ttttttttttaacatcatgtgtttggagagaaaaattgtcttcatgcatgtcctttttc 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tttttttttttaacatcatgtgtttggagagaaaaattgtcttcatgcatgtcctttttc 411
Query: 183 ttttcgatgctacaagcatgtgaagaggcactgcgttgggctggggtggtttctgcacat 242
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 410 ttttcgatgctacaagcatgtgaagaggcactgtgttgggctggggtggtttctgcacat 351
Query: 243 gagcgcctgcctggccttacagaagcactgatactttgcatcattttgtgtcctcacttg 302
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 350 gagcgcctgcctggccttacagaagcactgatactttgcgtcattttgtgtcctcacttg 291
Query: 303 tggttctgccttatcagatttaaatggattcaaatgtgggctaagcttgctagctagcac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tggttctgccttatcagatttaaatggattcaaatgtgggctaagcttgctagctagcac 231
Query: 363 gttaggagtataaaggaaataagattcgtgtgtgtgtgtgtgtgtgtgtgt 413
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gttaggagtataaaggaaataagattcgtgtgtgtgtgtgtgtgtgtgtgt 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 845
Length adjustment: 10
Effective length of query: 434
Effective length of database: 835
Effective search space: 362390
Effective search space used: 362390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_c14.g1 MSMg01no335_c14.g1 CHROMAT_FILE:
MSMg01no335_c14.g1 PHD_FILE: MSMg01no335_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:49 2005
(564 letters)
>mm_chr1_71445761_71446724
Length = 964
Score = 1083 bits (560), Expect = 0.0
Identities = 563/564 (99%)
Strand = Plus / Plus
Query: 1 tgagttgaagtcctgaacacatttttctttgagtcttatttaggaagatctaggaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagttgaagtcctgaacacatttttctttgagtcttatttaggaagatctaggaaggat 260
Query: 61 tgtttgagatacttaatataggctccaaaactccaaaacaaagaacgagcacagataacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttgagatacttaatataggctccaaaactccaaaacaaagaacgagcacagataacc 320
Query: 121 agtttccacatagctgtgtacacaaaattgatttttggcaaacaggaatctctctggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtttccacatagctgtgtacacaaaattgatttttggcaaacaggaatctctctggaat 380
Query: 181 ctggagaccttaagtataacaggaacaggttcctttttggtcctgatagcaaaccaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggagaccttaagtataacaggaacaggttcctttttggtcctgatagcaaaccaattg 440
Query: 241 gctactttttttgacaaggtgtatattgtctaagaggtcagcaaacacatgttcagtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctactttttttgacaaggtgtatattgtctaagaggtcagcaaacacatgttcagtgtt 500
Query: 301 tgaactctcccgtaattttttctctaccttcagacaggatttataactacagtgtaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaactctcccgtaattttttctctaccttcagacaggatttataactacagtgtaaggc 560
Query: 361 ctgcatattacaccggtttctcatctcgtctctgatcctgtttctttcagaaccctccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgcatattacaccggtttctcatctcgtctctgatcctgtttctttcagaaccctccag 620
Query: 421 attaggcagagagccactgctcactctttcttgtttcttgtcagctctatgggatactga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attaggcagagagccactgctcactctttcttgtttcttgtcagctctatgggatactga 680
Query: 481 gacctctgtgtcatttcctgcgtgagtctctaactcctatcaggtggcgccagttagttt 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacctctgcgtcatttcctgcgtgagtctctaactcctatcaggtggcgccagttagttt 740
Query: 541 acgactaactggcgttcattccta 564
||||||||||||||||||||||||
Sbjct: 741 acgactaactggcgttcattccta 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
