GTCCTCATGTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAAGGCCTCTACCTAAACATGATAAAAGCAATATACAGCAAACCAGTAGC
CAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAG
GGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTGAACATAGTACTT
GAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACA
AATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAG
TATATATAAGTGACCCTAAAAATTCTACCAGAGAACTCCTAAACCTGATA
AACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACGCAAACAAGTCAAT
GGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAA
CAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACT
CTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAA
GAAAGAAATTAAGGAAGATCTCAGAAGATAGAAAGATCTCCCATGCTCAT
GGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCCAAAGCAATC
TACAGATTCAATGCAATCCCCATCAAAATTTCAACTCAATTCTTCAACGA
ATTGGAAGGAGAAATTTGCAATTTGTCTGGGATACAAAAAAC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTTCGGAATTACCTGGATGGAGTCTAAATCCCC
AAGATAAATGTCCTCATAAGAGACATAGGGGAGGTACAAGATATGAAGAT
GTCAGAGTGAAAATAGAAAGATGTAAGCCATGCACCACAAACCAGATGAT
TCCCCCAACATTTAAGGGGAAGCTAGAAACATTAAGGACTAGAGTTCCAT
AGAGCCACATAAGCACTTTGAATCCAGAATCCTGGTCTGCAGAATTGAGA
GAGGATTTTATTGTTTTTTTTTTCTTTTTTTTTTAATTAGGTATTTTCCT
CATTTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTCCCTGCCA
CGATTTTATTGTTTTTAAAGTTTTTATTGTTTTAAATTTTGTAGAAATTT
GTTACAGAAGCCACACAGAATTAATATAGCCAGTGAAGGCTCTATGGACC
TGTATGTGGTCTAGAGATTTGGCTCTATTAATGACCAGGATGTAGGAAAA
ATGGGGGCTATTAAGGTTTCTGGTTTGGAAGACATATACAGAGCATGGCC
ACCAGCTGAAACTATTAAAATGGTTGTTTACAGCTTTATTAGTTACACAT
TTCTGAAGCTCAAGTAATTATGTGGGGAATATTTGTGTCCCATCTTTGTG
AATGCTGCCCTAGCACTGATAGCCACTGTGCTAGCTCTCTCT

Query= MSMg01no336_f07.g1 MSMg01no336_f07.g1 CHROMAT_FILE:
MSMg01no336_f07.g1 PHD_FILE: MSMg01no336_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:22 2005
         (555 letters)



>mm_chr1_66248976_66249930
          Length = 955

 Score =  857 bits (443), Expect = 0.0
 Identities = 446/447 (99%), Gaps = 1/447 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcggaattacctggatggagtctaaatccccaagataaatgtcctcataagagacata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cttcggaattacctggatggagtctaaatccccaagataaatgtcctcataagagacata 388

                                                                       
Query: 61  ggggaggtacaagatatgaagatgtcagagtgaaaatagaaagatgtaagccatgcacca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggggaggtacaagatatgaagatgtcagagtgaaaatagaaagatgtaagccatgcacca 328

                                                                       
Query: 121 caaaccagatgattcccccaacatttaaggggaagctagaaacattaaggactagagttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caaaccagatgattcccccaacatttaaggggaagctagaaacattaaggactagagttc 268

                                                                       
Query: 181 catagagccacataagcactttgaatccagaatcctggtctgcagaattgagagaggatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 catagagccacataagcactttgaatccagaatcctggtctgcagaattgagagaggatt 208

                                                                       
Query: 241 ttattgtttttttttt-cttttttttttaattaggtattttcctcatttacatttccaat 299
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttattgtttttttttttcttttttttttaattaggtattttcctcatttacatttccaat 148

                                                                       
Query: 300 gctatcccaaaagtcccccataccctccctgccacgattttattgtttttaaagttttta 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gctatcccaaaagtcccccataccctccctgccacgattttattgtttttaaagttttta 88

                                                                       
Query: 360 ttgttttaaattttgtagaaatttgttacagaagccacacagaattaatatagccagtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  ttgttttaaattttgtagaaatttgttacagaagccacacagaattaatatagccagtga 28

                                      
Query: 420 aggctctatggacctgtatgtggtcta 446
           |||||||||||||||||||||||||||
Sbjct: 27  aggctctatggacctgtatgtggtcta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)