ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAAGGTTCCTACCTAAACATAATAAAAAGTAATGTACAGCAAACCAGT
AGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAAT
CAGGAACTAGACAAAGCTGCCCACTTTCTCCCTACCTATTCAATTAGTAC
TTGAAGTCCTAGCCAGAGCAATTTGAGAACAAAAGGAGATCAAGGCGATA
CAAATTGGAAAAGAAGATGTCAAAATATCACTATTTGCAGGTGATATAAT
AGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACACTTAAACCTGA
TAAACAGCATCAGCGCAATACTTGGATATAAAATTAACTCAAACAAATCA
ATTGCCTTTCTCTACACAAAGGATAAACAGGATGAGAAAGAAATTAGGGA
AACAACATCCTTCACAATAGTCACAAATAATATAAAATACCTGGTGTGAC
TCTAACTAAGGAAGTGAGAGATCTGTATGAGAAGAACTTCAAGTCTCTGA
AGAAAGAAATTGAAGAAAATCTCAGAAGATGGAAAGATCTCCCATGCTCA
TGGNATGGCAGGATCAATATAGTAAAAATGGCTATCTTGCCAAAAGCAAG
CTACAGATTCTATGCATTCCCCATCAAAATTCCACTCAATTCCTCATCAA
ATAAAAAGGGGATTTGCAAATTCTCTGGGATAACAAAAA

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCACACCCCTAAGCCCCTTACCCCATAAAA
CCCCTATCTTCCGAGCCTCGTGGCCGACATCCGTTATCTCCTGTGTGGGA
TGCATGCTGATCCAGAGCTCCGTCATTAAACGACCTCTTGTAATTACATC
AAGATGGTCCTTCATGATTTTTTGGGTGCATGTCGAATTGGGAATTGAGT
GGGGGGTTTTCCCGCTAGGTTCTATCAGCTGCATGGACTTTCCTTTGAAA
CAATAGATAAATGAGCCTTGGTGAGTGTTCACCCATGCTAGTAGACCCAT
ACACTGTTTTTATCTCACTTTGGAATGCTCCCTTTATGTGTCAACTTGGG
AGCATCTGCTTATAGAAAACAACTACCTGATAACCATTCATAGCTGCTTG
AATATAAAAAATAATATGGATATATGTTATATTATGCTTATTACATAATA
TTTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNGNGTGNNNN
NNNTTNNNTNTTTNNNTNNNTNGTTTTTNNNNNNNNNNNNNTGTTTNNNT
GGTTTTTTTNTNNTTTGGNTTTTTTTGTGTNTTGTTTTTTTTTTTGTTTT
TTTGTTTTGGNNGTTGTGGTTTTGTTNGTGTTGGTTNTTTTTTTTTTGGT
TGTTTTTTTTTTGTGGTGTNTTTTTGGTTTGTTTT

Query= MSMg01no336_f14.g1 MSMg01no336_f14.g1 CHROMAT_FILE:
MSMg01no336_f14.g1 PHD_FILE: MSMg01no336_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:23 2005
         (469 letters)



>mm_chr1_66927637_66928505
          Length = 869

 Score =  907 bits (469), Expect = 0.0
 Identities = 469/469 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacacccctaagccccttaccccataaaacccctatcttccgagcctcgtggccgacatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacccctaagccccttaccccataaaacccctatcttccgagcctcgtggccgacatc 260

                                                                       
Query: 61  cgttatctcctgtgtgggatgcatgctgatccagagctccgtcattaaacgacctcttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgttatctcctgtgtgggatgcatgctgatccagagctccgtcattaaacgacctcttgt 320

                                                                       
Query: 121 aattacatcaagatggtccttcatgattttttgggtgcatgtcgaattgggaattgagtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattacatcaagatggtccttcatgattttttgggtgcatgtcgaattgggaattgagtg 380

                                                                       
Query: 181 gggggttttcccgctaggttctatcagctgcatggactttcctttgaaacaatagataaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggggttttcccgctaggttctatcagctgcatggactttcctttgaaacaatagataaa 440

                                                                       
Query: 241 tgagccttggtgagtgttcacccatgctagtagacccatacactgtttttatctcacttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagccttggtgagtgttcacccatgctagtagacccatacactgtttttatctcacttt 500

                                                                       
Query: 301 ggaatgctccctttatgtgtcaacttgggagcatctgcttatagaaaacaactacctgat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaatgctccctttatgtgtcaacttgggagcatctgcttatagaaaacaactacctgat 560

                                                                       
Query: 361 aaccattcatagctgcttgaatataaaaaataatatggatatatgttatattatgcttat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaccattcatagctgcttgaatataaaaaataatatggatatatgttatattatgcttat 620

                                                            
Query: 421 tacataatatttgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 469
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacataatatttgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 669


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space:   394281
Effective search space used:   394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)