Query= MSMg01no338_a07.b1 MSMg01no338_a07.b1 CHROMAT_FILE:
MSMg01no338_a07.b1 PHD_FILE: MSMg01no338_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:34 2005
(535 letters)
>mm_chr1_60425196_60426130
Length = 935
Score = 971 bits (502), Expect = 0.0
Identities = 523/530 (98%)
Strand = Plus / Plus
Query: 6 gaattccaagccccatgttttcatattttattctgatctacttcattttctttttttcgg 65
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccaagccccatgtgttaatattttattctgatctacttcattttctttttttcgg 265
Query: 66 gaaccagacagggtaatccacacacacacctacacagtgggaatcatgtgtggtcccagc 125
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 266 gaaccagacagggtaatccacacacactcctacacagtgggaatcatgtgtggtcccagc 325
Query: 126 tacttggtgcactgaggcaagaggagcatcaatttaagttcaggagttagaaacccgtct 185
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 326 tacttggtgcactgaggcaagaggaacatcaatttaagttcaggagttagaaacccgtct 385
Query: 186 cctaagggggaaaaaggcttcccgagagccacaggttacttccatacacaatgggtattg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 386 cctaagggggaaaaaggcttcccgagagccacaggttacttccatacacaatgggtactg 445
Query: 246 ggtcatagcttctctaaagtatttatgacctgctgggtgctggttctcactgtgtgcaca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggtcatagcttctctaaagtatttatgacctgctgggtgctggttctcactgtgtgcaca 505
Query: 306 ggccacaaaacatcctgtgctcatgcgtgctgctctagggatcatcctgacacccaccag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggccacaaaacatcctgtgctcatgcgtgctgctctagggatcatcctgacacccaccag 565
Query: 366 aggcttttaaaattcagtttcatacatcctctgtgatagtattcattgtcattcttatcg 425
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aggcttttaaaattcagtttcatacatcctctgtgatagtattcattgtcattcttatca 625
Query: 426 cttgatggatgtatttaggttaattcccctttgcaaaaattatatttcaggaagacaata 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cttgatggatgtatttaggttaattcccctttgcaaaaattatatttcaggaagacaata 685
Query: 486 attcccaagctttgttacgccacagttgtgtgttgttttgctttaatatt 535
||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 686 attcccaagctttgttacgccacagttttgtgttgttttgctttaatatt 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_a07.g1 MSMg01no338_a07.g1 CHROMAT_FILE:
MSMg01no338_a07.g1 PHD_FILE: MSMg01no338_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:34 2005
(384 letters)
>mm_chr1_60599951_60600729
Length = 779
Score = 692 bits (358), Expect = 0.0
Identities = 374/382 (97%), Gaps = 5/382 (1%)
Strand = Plus / Minus
Query: 1 atcttctatcgggatttataagatgtgtttcctagaaatcttaagtttataaaataaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atcttctatcgggatttataagatgtgtttcctagaaatcttaagtttataaaataaatg 381
Query: 61 aaacaaacatctgaaagctttatcaggtagaggatatctgatcagctatagtgttgtctc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaacaaacatctgaaagctttatcaggtagaggatatctgatcagctatagtgttgtct- 322
Query: 121 tgaatgtcagcaagaggtcaggacatactaaagttaatgaataataggaagctccaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ----tgtcagcaagaggtcaggacatactaaagttaatgaataataggaagctccaggat 266
Query: 181 acccttttattccctttgttcatgtggttggtaacatttttaaaaatcaaaacatctaga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acccttttattccctttgttcatgtggttggtaacatttttaaaaatcaaaacatctagg 206
Query: 241 tttacttataatttatttttatgtttaaatttttgtgtatgtgtgtatagatgctctaag 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tttacttaaaatttatttttatgtttaaatttttgtgtatgtgtgtatagatgctctaag 146
Query: 301 aagtcagaggctttggcctcttggtagcttgagtttcaggccatttggggccacctgact 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 145 aagtcagaggctttggcctcttggtagcttgagtttcaggccgtttggggccacctgact 86
Query: 361 gacataggtgctaggaacagtg 382
||||||||||||||||||||||
Sbjct: 85 gacataggtgctaggaacagtg 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 779
Length adjustment: 9
Effective length of query: 375
Effective length of database: 770
Effective search space: 288750
Effective search space used: 288750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
