NNTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCATCCTCTCTCTAGAAGACAGAAAGTCGAGGGAATTTAAAA
GAAGATATGAGAAACGGCACATCACAGACAAATTCCTTCATGGTCCTAAT
CTTTGCAAGATCATTTCATATTTATTTGCTATATTTTTATTCATAGATTT
ATCACATAAATATATAATCTTTCTGTTTATGATTTTTTTTTCTCTCCCAG
CTTCTTACTTCTTCTGTCATTTGCTTAGAACTCATTTCATCTGTTTCCAT
GAAGCAATTTTTTAACTTCCTGCCTGCCTGTTTATAAAATTCCTGTATTC
ATTAACAGGGATTAGCGCTTAAGCATGGAATTACAGATTATTGTCATTTG
TCCCTCAACTTTGAAGAAACTGCTGTAACTTATTTCCTGGGATCTAATGT
TCAATGTTCCACCTAGAAACTAGCAATTCATTCCCAGTTTCTCCCTCTCT
CTTCAGCTTGCTTTCTGGCAGGCCAGCCTAGTGATTAGGAATCTTGTATC
TCTTCAGGGCTCTGCTTGTTCCCACAGTGCCTCCTCTCTCCTCTGATGCA
GCCTCTCCATGGGAACTACAAACTTATAACATTTGTCAGCATTCTGCCTT
CTACTTTTGATATCTACCATGCTTTCTACTGTCATGTGACTACATCAACT
TTTAAATATATTGGTATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCT
GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA
CCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCA
GGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCA
TTGTTGGTGGGAGTGCAGGCTTGTACAATCACTCTGGAAATCAGTCTGGT
GGTTCCTCAGATTATTGGACATAGTACTACCGGAGAATCCAGCAATACCT
CTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATG
CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG
AACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATC
TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATT
CCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACAC
ATTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATATTAG
CCCCAAACCTAGGATACCCATGATATAAGATATAAATTGCTAAACTCTTG
ATACTCAAGAAGAATGAAGACTTGAGTGTGGACACCATGTCTCCTCCTTA
GG

Query= MSMg01no338_g08.b1 MSMg01no338_g08.b1 CHROMAT_FILE:
MSMg01no338_g08.b1 PHD_FILE: MSMg01no338_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:01 2005
         (635 letters)



>mm_chr1_140581615_140582643
          Length = 1029

 Score = 1143 bits (591), Expect = 0.0
 Identities = 620/631 (98%), Gaps = 6/631 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatcctctctctagaagacagaaagtcgagggaatttaaaagaagatatgagaa 64
           ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatccact-tctagaagacagaaagtcgagggaatttaaaagaagatatgagaa 263

                                                                       
Query: 65  acggcacatcacagacaaattccttcatggtcctaatctttgcaagatcatttcatattt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acggcacatcacagacaaattccttcatggtcctaatctttgcaagatcatttcatattt 323

                                                                       
Query: 125 atttgctatatttttattcatagatttatcacataaatatataatctttctgtttatgat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atttgctatatttttattcatagatttatcacataaatatataatctttctgtttatgat 383

                                                                       
Query: 185 ttttttttctctcccagcttcttacttcttctgtcatttgcttagaactcatttcatctg 244
           ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttttt--ctctcccagcttcttacttcttctgtcatttgcttagaactcatttcatctg 441

                                                                       
Query: 245 tttccatgaagcaattttttaacttcctgcctgcctgtttataaaattcctgtattcatt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttccatgaagcaattttttaacttcctgcctgcctgtttataaaattcctgtattcatt 501

                                                                       
Query: 305 aacagggattagcgcttaagcatggaattacagattattgtcatttgtccctcaactttg 364
           |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||
Sbjct: 502 aacagggattagcgcttaagcatggaattaca-a--attgtcatttgtccctcaactttg 558

                                                                       
Query: 365 aagaaactgctgtaacttatttcctgggatctaatgttcaatgttccacctagaaactag 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 559 aagaaactgctgtaacttatttcctgggatctaatgttcaatgttccacctacaaactag 618

                                                                       
Query: 425 caattcattcccagtttctccctctctcttcagcttgctttctggcaggccagcctagtg 484
           |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 619 caattcattcccagtttctccctctctctttagcttgctttctagcaggccagcctagtg 678

                                                                       
Query: 485 attaggaatcttgtatctcttcagggctctgcttgttcccacagtgcctcctctctcctc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 attaggaatcttgtatctcttcagggctctgcttgttcccacagtgcctcctctctcctc 738

                                                                       
Query: 545 tgatgcagcctctccatgggaactacaaacttataacatttgtcagcattctgccttcta 604
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tgatgaagcctctccatgggaactacaaacttataacatttgtcagcattctgccttcta 798

                                          
Query: 605 cttttgatatctaccatgctttctactgtca 635
           |||||||||||||||||||||||||||||||
Sbjct: 799 cttttgatatctaccatgctttctactgtca 829


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1029
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1019
Effective search space:   636875
Effective search space used:   636875
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)