ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAGTACTCTCTGACTTTTGTTCTTCTCCCTAAACAATCTCCGGGTTGAA
CCGAGTCTATCTCTCAGGTGCCCAACTGAGCAGGTAGCTTTGAGCCCTTT
GTGCTCTCTGCCCAGCAGGAAGCTGAGCATTCGCAGTTCACACCTAGAGC
TCCTAGCACTGTTGAATGCTGCAGCCTGGGCTGCCATGCTGAGATCCCAC
AGGCCCACCTTTCAACTCCACCGAGGCTCAGGGCTAATCTTTTAGGCTCT
TACTTCCTATCTCCCCACCCGAACTCACCCCACCCCAACCAACCCAAAAA
ACTAAGGTAGTTTTCAGTTGACACTGTCAAGCACTGAAATAAACAAGTTG
AGCTAGAATTCTTGGGTTGCATAGGAACATAGGAAGACCCAATACTCACA
GGCTAAGGCTCACAGACAGTAGCCAAGATAGAGGGAGAGCTGGGATAAGG
CTGGGGGTACAGCAGGTTACATATTGCCTTTCAAAGGATCAGAGCCTTCC
ATCTATATCTGCAAGTGTTCGTGTTGTGTGATAGAACTAGTCTCCCCAGC
TTCCCATCCATCACCCACCTCTGTAAATCTAGCAAAGGACTTTGAGGTTT
CTATCCAATGCCTGGAGCCTCTCTTAAGTGAGGCTCCAGCTCTCTGGCTC
AAATGGGAACAGATGAACACTGAGTCTCTCTATTTCCGCCN

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTAACTGAGGAATACCTAATGGCCAAGAAGCAC
CCAAATAAATGTTCAACATCTTTAGGCATCAGGGAAATGCAAATCAAAAC
AACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCACTCAGG
TAACAGCAGATGCTGGAGAGGTTGTAGAGAAAGAACAGTCATTCATTGCT
GGTGGGATTGTAAGCTGATACAATCACTCTGGAAATCATTTTGGCAGGTC
CTCAGAAAATTGGACATAGTACTACCTGAGGACCCAGCAATACCACTCCT
GGGCATATACCCAGAAGATGCTCCAACATATAATAAGGACACATGCTCCA
CTATGTTCATCACAGCCTTATTTATAATAGGCAGGAGCTGGAAAGAACCC
AGATGTTCCTCAACAGAGGAATGGATACAGAAAATCTGGTACATTTTACA
CAATGGAGTACTACTCAGCTATTAAAAACAATGGATTTATGACACTCTTA
GGCAGATGGATGGAACTAGAAAATATCATCCTGAGTGAGGTAACCCAATC
ACAAAAGAATACACACGGTATGCACTACTGATAAGTGGATATTATCCCAG
AAACTCAGAATGCCCAAGATACAATTCCCCAAACACATGAAACTTCAGAA
GAAGGAAGATTAAAGTGTGATTACTTCGATCCTTCCTAAAA

Query= MSMg01no338_h01.b1 MSMg01no338_h01.b1 CHROMAT_FILE:
MSMg01no338_h01.b1 PHD_FILE: MSMg01no338_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:04 2005
         (632 letters)



>mm_chr1_83402974_83404006
          Length = 1033

 Score = 1123 bits (581), Expect = 0.0
 Identities = 614/625 (98%), Gaps = 1/625 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtactctctgacttttgttcttctccctaaacaatctccgggttgaaccgagt 64
           |||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 829 gaattcagtactctatgacttttgttcttctccctaaaaaatatccgggttgaaccgagt 770

                                                                       
Query: 65  ctatctctcaggtgcccaactgagcaggtagctttgagccctttgtgctctctgcccagc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ctatctctcaggtgcccaactgagcaggtagctttgagccctttgtgctctctgcccagc 710

                                                                       
Query: 125 aggaagctgagcattcgcagttcacacctagagctcctagcactgttgaatgctgcagcc 184
           ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 709 aggaaactgagcattcgcagttcacacctagagctcctagtactgttgaatgctgcagcc 650

                                                                       
Query: 185 tgggctgccatgctgagatcccacaggcccacctttcaactccaccgaggctcagggcta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgggctgccatgctgagatcccacaggcccacctttcaactccaccgaggctcagggcta 590

                                                                       
Query: 245 atcttttaggctcttacttcctatctccccacccgaactcaccccaccccaaccaa-ccc 303
           |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 589 atcttttaggctcttacttcttatctccccaccccaactcaccccaccccaaccaacccc 530

                                                                       
Query: 304 aaaaaactaaggtagttttcagttgacactgtcaagcactgaaataaacaagttgagcta 363
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaaaaactaaggtagttttcagctgacactgtcaagcactgaaataaacaagttgagcta 470

                                                                       
Query: 364 gaattcttgggttgcataggaacataggaagacccaatactcacaggctaaggctcacag 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaattcttgggttgcataggaacataggaagacccaatactcacaggctaaggctcacag 410

                                                                       
Query: 424 acagtagccaagatagagggagagctgggataaggctgggggtacagcaggttacatatt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acagtagccaagatagagggagagctgggataaggctgggggtacagcaggttacatatt 350

                                                                       
Query: 484 gcctttcaaaggatcagagccttccatctatatctgcaagtgttcgtgttgtgtgataga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gcctttcaaaggatcagagccttccatctatatctgcaagtgttcgtgttgtgtgataga 290

                                                                       
Query: 544 actagtctccccagcttcccatccatcacccacctctgtaaatctagcaaaggactttga 603
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 actagtctccccagcgtcccatccatcacccacctctgtaaatctagcaaaggactttga 230

                                    
Query: 604 ggtttctatccaatgcctggagcct 628
           ||||||||| |||||||||||||||
Sbjct: 229 ggtttctatacaatgcctggagcct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space:   636306
Effective search space used:   636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)