XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
TTGGGTACCATTGTGGCCAGATACGCTTGGCTAACGCTGCCTTATAAGTC
ATCATTTTGCAGACTCAGAATGAGCAGTGCCTCATTATTGACTCTAAGAA
GATGAAGGACGATTAATTTAACTTTATATAACCCTCTGTTTCTCAAACCT
GGTGAATGGTAGAATCCTTCCCTTACCTGTTCACATCCTGAAGAAGTAGC
TTTTAGTAGCACATTCATAAGGAAAGGATGGTTTAGTTTAATGTCTCCAG
CCTAACCATGGAGAATCTATTAGTCTTGTTTTACAGATGACAAGGCAGAC
CCATCATACTGTCCTTGACCTAAGCCTTGACATTTCTGTGGCTCTGGTTG
ACACTGTGGCTGGCCTGTGGGAGACTCTAAGGCAGAAAACAAGGCCGAGC
CATCCTTTGATTGACCGATGACACAAATGATCTGATAAAAATACCATCTT
AAGGAACTTCATTTGGTCTAATTTCCTCTTTGCCATAGACCCAAGCTCCA
TCTTTTGCTTATTTTGTCACAATTAGAGAGAGGGCAGCTGATTTTCAAGG
TTCTAATACCACTTTGTTTAAAAGACCTTTTTAAAAAAAAAAGATTTATT
TACTATTATGCATAAGTACACTATAGTTGACTTCAGAAGCACCAGAAGAG
GGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATTTGGTTGCTGGG
N

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTAAATTATTTGCATGGTTATCTATCACT
TCAGGGGATAAAACCTTCCCACCCCTTAAATGTGGGCTCCACATGAGACT
TCCTTCAAAAGAACAGAATACAGAGGCAGAAAAAGAAACATTTGTCGTAT
CTCAGCCAGATGTTGAGTTGATGCTGCAGTGATGTGTGTTGATGGCCTGC
TTTAGCTTCGATGGAACGAGAAGGACATTTTGCTCCTGTGTTCTCCCCCA
GACCTATGACCCCTGTACAATAAAGAGAAAACTCAGTCCTGGACATTGTC
AAGAACACCCACAGAGCATTCCAAAATTGTCAAGATCATCCGAAGGGGTC
GGGGGAAGTCCAGGGCTAGGGAAATGGCTCAGTCAGTTATGTGCCTGCCC
TGTAAGCGTGAATAGCCAACCCTAGCTCAATCTCCATCACTCACGGGGGG
AAAAAAAGCCAGGCATGGCAGCACAAACTTGTGATCCCACCATTCTAAAG
GCAAGGATTCCTCAGCCAGCCAGGCTAGCCAATCAGTGAACTCCGGATTC
AGGAAGAGACCTCACCTCAAATATAAAATAGACCATGCCTGAGAAAGATG
CCTGATGTCTGCCTCTAGCTTTTTCACACAAACACACACACACACACACA
CACACTNANACACCCCCCGAGAGAGAGA

Query= MSMg01no338_h18.b1 MSMg01no338_h18.b1 CHROMAT_FILE:
MSMg01no338_h18.b1 PHD_FILE: MSMg01no338_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:07 2005
         (651 letters)



>mm_chr1_72012555_72013606
          Length = 1052

 Score =  982 bits (508), Expect = 0.0
 Identities = 528/538 (98%), Gaps = 7/538 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcttgg----gtaccattgtggccagatacgcttggctaacgctgccttataag 60
           ||||||||||||    ||   |||||||||||||||||||||||||||||||||||||| 
Sbjct: 535 gaattctcttgggaaagt---attgtggccagatacgcttggctaacgctgccttataaa 479

                                                                       
Query: 61  tcatcattttgcagactcagaatgagcagtgcctcattattgactctaagaagatgaagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tcatcattttgcagactcagaatgagcagtgcctcattattgactctaagaagatgaagg 419

                                                                       
Query: 121 acgattaatttaactttatataaccctctgtttctcaaacctggtgaatggtagaatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acgattaatttaactttatataaccctctgtttctcaaacctggtgaatggtagaatcct 359

                                                                       
Query: 181 tcccttacctgttcacatcctgaagaagtagcttttagtagcacattcataaggaaagga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tcccttacctgttcacatcctgaagaagtagcttttagtagcacattcataaggaaagga 299

                                                                       
Query: 241 tggtttagtttaatgtctccagcctaaccatggagaatctattagtcttgttttacagat 300
           ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 298 tggtttagtttaatgtctccagcctaaccatggagaagctatcagtcttgttttacagat 239

                                                                       
Query: 301 gacaaggcagacccatcatactgtccttgacctaagccttgacatttctgtggctctggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gacaaggcagacccatcatactgtccttgacctaagccttgacatttctgtggctctggt 179

                                                                       
Query: 361 tgacactgtggctggcctgtgggagactctaaggcagaaaacaaggccgagccatccttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tgacactgtggctggcctgtgggagactctaaggcagaaaacaaggccgagccatccttt 119

                                                                       
Query: 421 gattgaccgatgacacaaatgatctgataaaaataccatcttaaggaacttcatttggtc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gattgaccgatgacacaaatgatctgataaaaataccatcttaaggaacttcatttggtc 59

                                                                     
Query: 481 taatttcctctttgccatagacccaagctccatcttttgcttattttgtcacaattag 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  taatttcctctttgccatagacccaagctccatcttttgcttattttgtcacaattag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space:   667922
Effective search space used:   667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)