GGCCGCTATACGACTCACTATTTCGAACGGAGCCGCGGAATTCCTGGTTT
TCTAAGACTTTTACCATGAATTGTGGTTAGATTTTGTTAAATGCTTTCTT
AGCATCTAGTGAGATGATGATGTTTTTTTTTTTTCTTTGAGTTTGTTTAT
ATAGTGGATTATGTTGAACCATCCCTGCATCCCTGGAATGAAGCCTACTT
GATCATGATGATGATCCTATTGATGTGTTCTATGCTTCACGAATTTTATT
GAATAATTTTGCATCAATATTCTTAAGGGAAATTGATCTAAAGTTCTCTT
TTTTTTTTTAGGNCTTTGTGTGGTTTAGGTATCAGAATAACTGTGTATTC
CTCCCCCCCCTCGTGTAGAGTACCTTCTGTTTCAATTTTGTAGAGTAGTT
TCAACCAGTACTGGTATTACATCTCTCTTTGAGGTCCGTTATCCTCTTCC
GCTACTCCCACTTCTACCCTTACTTTACCTCGTAGCCCAATATACCCCCG
TATCGCCCCTATTCCCTTTACTCACCTTTTTACTATCCTTTATGCTAATC
CCTTTCCTTTATTTTATCCTACTCCCCCCCCCTTCTTTTCCCCTATTTTC
CTCCCCCCCCTTCCCATTACTTTTTTTTTCCCCAACCCCACACCATTTTT
TTTTCTTTTTCTATCCCCCCTATTTACCTAACACCCCTCTTTTTTTTCTC
CTCTCCCCTCCCCTCTTTTTTATTCTCACTCTTTTCCCCCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXAAGGTCCATACCTAAACATAATAAAAGCAATATACTG
CATGCAAGCCAACAGCCAATATCAAATTTAGTTTGGACTAAAGTGACATT
AAACAATGAGATTCAGGAGATTAACCATGAATTTTGTTACTATCAAGCCA
TTTTTTTAGGAGCATTCTTTACCCGGTATCAAACATTAAACTATATATTT
AAAGTGCTATTGTAAAATCACAGTGAACTTTAACTTTTCTTTTAACAGTT
TTGATTTGTATTATTGTTATCCATAAGTAATATTAAAAAACTGACAATGT
AACCAAGTTGGTTTATTTTACAATTGCTGGAAAGTGTTTTCTAAATACAA
ATTTTGTTTGACCAAAAGGGAAAACCACTGAGCAACATGCTCAGGATGAT
TCTAGTCAAACCCATGAGACCTGCTCCTTCCACTACAGCAACACACACAT
ATTCATGGATCTGATTTTGCTTTTTCCCATAANATTATAAATAGTTTATA
GTTTCATTTTCATATCAATCTCATTTTCAAGCATGCATAATATATACTTA
ATTTCTATGAATTTTATTAAGTCCCGCTGCGTTGGAATGCCATGGTTAGC
TTATTTCTTAATTCAAAATATTCCAAAAATTTGAAAAACTTTCTATTTTT
TAATACCCCCCCCTTTTTGGTTAAATTTCCCT

Query= MSMg01no342_m05.g1 MSMg01no342_m05.g1 CHROMAT_FILE:
MSMg01no342_m05.g1 PHD_FILE: MSMg01no342_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:22 2005
         (499 letters)



>mm_chr1_50664490_50665380
          Length = 891

 Score =  893 bits (462), Expect = 0.0
 Identities = 487/499 (97%), Gaps = 8/499 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaggtccatacctaaacataataaaagcaatatactgcatgcaagccaacagccaatatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 aaggtccatacctaaacataataaaagcaatatactgcatgcaagccaacagccaatatc 697

                                                                       
Query: 61  aaatttagtttggactaaagtgacattaaacaatgagattcaggagattaaccatgaatt 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 696 aaatttagtttggactaaagtgacattaaacaatgagattc-ggagattaaccatgaatt 638

                                                                       
Query: 121 ttgttactatcaagccatttttttaggagcattctttacccggtatcaaacattaaacta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttgttactatcaagccatttttttaggagcattctttacccggtatcaaacattaaacta 578

                                                                       
Query: 181 tatatttaaagtgctattgtaaaatcacagtgaactttaacttttcttttaacagttttg 240
           ||||||||||||||||||||||||||||||| ||||||||     |||||||| ||||||
Sbjct: 577 tatatttaaagtgctattgtaaaatcacagtaaactttaa-----cttttaacggttttg 523

                                                                       
Query: 241 atttgtattattgttatccataagtaatattaaaaaactgacaatgtaaccaagttggtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 atttgtattattgttatccataagtaatattaaaaaactgacaatgtaaccaagttggtt 463

                                                                       
Query: 301 tattttacaattgctggaaagtgttttctaaatacaaattttgtttgaccaaaagggaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tattttacaattgctggaaagtgttttctaaatacaaattttgtttgaccaaaagggaaa 403

                                                                       
Query: 361 accactgagcaacatgctcaggatgattctagtcaaacccatgagacctgctccttccac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 accactgagcaacatgctcaggatgattctagtcaaacccatgagacctgctccttccac 343

                                                                       
Query: 421 tacagcaacacacacatattcatggatctgattttgctttttcccataanattataaata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 342 tacagcaacacacacatattcatggatctgattttgctttttcccataaaattataaata 283

                              
Query: 481 gtttatagtttcattttca 499
            ||||  ||||||||||||
Sbjct: 282 cttta--gtttcattttca 266


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 891
Length adjustment: 10
Effective length of query: 489
Effective length of database: 881
Effective search space:   430809
Effective search space used:   430809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)