GCGGCGCTAAACGACTCCTTATCGTAGCGAGCGCGGAATTCCTGACTGCA
CATGACTTTTATCATGAAGGGGTATTGGATTTTGTCAAATGCTTTCTCAG
CATCTAACAAGATAATCATGTGAATTTTGTCTTTGTGTTTGTTTATATAG
TGGATTACGTTGATGGATTTCCATATATTAAACCATCCCTACAACCCTGT
GATGAAACCTACTTGGTCAGGATGGATGATTGCTTTAATGTGGTCTTCGA
TTCCGCTCGGGAGGATTTTATTGAGCATCCTTGCATCATTATACATAATT
TTTTTTGTACAGACATCCACTATCCTCCTGGGAACATAGCCTGAATTAGC
CCCCATCGCACCCATGGACTCCTGCTCCCGCATGTCCATAGNACCCCCCC
CCCCCCCCCGGGGAANTTTTAATGTATTCTTTATGCCCCCTCCATTCATC
AATGGTTACTGAATAATGTTTCCCCTTACACTATACCGCTTTACCCCATT
TTCCCTTATTTCCGCCCGATTTTACTAATATTCCCCCCATTTTCCTCTTC
CCTTTTTTATTTGCCCTTATTTCTTCTTTTTCTTATCTCTCCCCCCCTTT
TTCTTTTCTCCCTTATGTAGTCTCCCCCCCTAACAGATTCTCTTTCTTTC
CCTTATTTCCCTCCCCTTTTTCTTCCTTTTTCTCTCCCCCCCTATTTACA
CTTCACCCTCGTTTTTTTTGTTTCCGACAGCCACCCCTCTTTTCTATTTT
ACTTTATCTCTACCCCN

TGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAAAATAAAAAGGAAAAAAATTTAAGTTAAGCTAT
GAGGGGACTGAGGGGACTTTAGTGGGCCAGGTACTTATCTTAACCAACAT
GTATACGTATTCAATCCTTAGCACTATAATAGATAAAAAACAACTAATTA
AATTATGAAGAAAAAAAAAAGACATGTGCGTATTTCTTTTCTGGATTTAC
CAGAATGAAGAATCAGATAAACCAGCTGCCTTGCTCTGATCTGCAGGAGG
CCTTGACTCTGGGTAACTCAAGCTCCATCCTGCGTTCAGTAGAGATAATT
AGGAAGCCCAGTGTCCCAGGCCCCTATTTGACTATGACAGACATCTGGCA
TTCTTAACAGAAAAATAAAGGTCGCTCTTTTTTAAAAAGCAGGGACCCCG
TTGCCTGAATACAATGGGGAACACACACCATGGTAAATGTCGCGGACTTG
TACCCTGCTTGTCCTTATTTCAATTTCCAAAATTTAAAAATAATAAGAAG
AGCTCTACCAATAACCCGGGCCTGGTTGGGGTTCTCCCGGCCCAAGAGTA
TACCGGGGGTCTCACGAGGGGGTTTTTTCCCCCCGCTGTGCCTATGGCCT
CTGGTAGGCTATTCCCTGTTCCCCCCTCCTCCTAATCTTGTGTATTTCCT
AGCCTGTCTCTTTTCCCCCTCGCCCCCGCCCTGTCTTTTTTTCCCTT

Query= MSMg01no342_o17.g1 MSMg01no342_o17.g1 CHROMAT_FILE:
MSMg01no342_o17.g1 PHD_FILE: MSMg01no342_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:34 2005
         (426 letters)



>mm_chr1_158985851_158986675
          Length = 825

 Score =  808 bits (418), Expect = 0.0
 Identities = 424/426 (99%), Gaps = 1/426 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaataaaaaggaaaaaaatttaagttaagctatgaggggactgaggggactttagtggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaataaaaaggaaaaaaatttaagttaagctatgaggggactgaggggactttagtggg 566

                                                                       
Query: 61  ccaggtacttatcttaaccaacatgtatacgtattcaatccttagcactataatagataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccaggtacttatcttaaccaacatgtatacgtattcaatccttagcactataatagataa 506

                                                                       
Query: 121 aaaacaactaattaaattatgaagaaaaaaaaaagacatgtgcgtatttcttttctggat 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaacaactaattaaattatgaag-aaaaaaaaagacatgtgcgtatttcttttctggat 447

                                                                       
Query: 181 ttaccagaatgaagaatcagataaaccagctgccttgctctgatctgcaggaggccttga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttaccagaatgaagaatcagataaaccagctgccttgctctgatctgcaggaggccttga 387

                                                                       
Query: 241 ctctgggtaactcaagctccatcctgcgttcagtagagataattaggaagcccagtgtcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctctgggtaactcaagctccatcctgcgttcagtagagataattaggaagcccagtgtcc 327

                                                                       
Query: 301 caggcccctatttgactatgacagacatctggcattcttaacagaaaaataaaggtcgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caggcccctatttgactatgacagacatctggcattcttaacagaaaaataaaggtcgct 267

                                                                       
Query: 361 cttttttaaaaagcagggaccccgttgcctgaatacaatggggaacacacaccatggtaa 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 266 cttttttaaaaagcagggaccccgttgcctgaatacaatggagaacacacaccatggtaa 207

                 
Query: 421 atgtcg 426
           ||||||
Sbjct: 206 atgtcg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 825
Length adjustment: 9
Effective length of query: 417
Effective length of database: 816
Effective search space:   340272
Effective search space used:   340272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)