Query= MSMg01no343_b01.b1 MSMg01no343_b01.b1 CHROMAT_FILE:
MSMg01no343_b01.b1 PHD_FILE: MSMg01no343_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:45 2005
(348 letters)
>mm_chr1_94182783_94183530
Length = 748
Score = 619 bits (320), Expect = 0.0
Identities = 343/354 (96%), Gaps = 6/354 (1%)
Strand = Plus / Plus
Query: 1 ataattcatgctcttataaacatggaaatccactccatagcgtctccaggagacgaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ataattcatgctcttataaacatggaaatccactccatagcgtctccaggagacgaggca 254
Query: 61 cttcggggggagtgacatctctggggacctgaagagctgctctgctatccttgggctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cttcggggggagtgacatctctggggacctgaagagctgctctgctatccttgggctgag 314
Query: 121 cacagagcatagacgtgaacatactcttgttgtacgttacaacctcactttctgcctcat 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cacagagcagagacgtgaacatactcttgttgtacgttacaacctcactttctgcctcat 374
Query: 181 gacagtactgtgactcccaggatgaaaggcattgtcttgagccacacacagactttccgc 240
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 375 gacagtactgtgtctcccaggatgaaaggcattgtcttgagccacacacagactctccgc 434
Query: 241 ccccccaccccc------catttataccctggaaatgtccttgttcagagctactactct 294
|||||| ||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 435 ccccccccccccgccccccatttagaccctggaaatgtccttgttcagagctactactct 494
Query: 295 ggactctgggaggccaaggacaccctggttgtgtcctgattctggggatatcaa 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggactctgggaggccaaggacaccctggttgtgtcctgattctggggatatcaa 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_b01.g1 MSMg01no343_b01.g1 CHROMAT_FILE:
MSMg01no343_b01.g1 PHD_FILE: MSMg01no343_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:45 2005
(374 letters)
>mm_chr1_94403535_94404308
Length = 774
Score = 667 bits (345), Expect = 0.0
Identities = 363/369 (98%)
Strand = Plus / Minus
Query: 1 ttggatactgttgcattggctttcttaccgcaaatggctttccaactagaaactacacag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 569 ttggatactgttgcattggctttcttaccgcaaatgcctttccaactagaaactacacag 510
Query: 61 tctcctgctccatcaagagtgtcagttcacagcttacatctgttagtgggcagacatatg 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tcccctgctccatcaagagtgtcagttcacagcttacatctgttagtgggcagacatatg 450
Query: 121 aaacgctgatgtctccccagaatgacgggtctcacaaacctaacgttgcttaggagctat 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 449 aaacgctgatgtctccccagaatgacgggtctcacaaacctaacgttgtttaggagctat 390
Query: 181 gctagtgcattgggagcagtcacctcacagttgtcctgtcacccggatggcttctccatc 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 389 gctagtgcattgggagcagtcacctcacagttgtcctgtaacccggatggcttctccatc 330
Query: 241 cccaagcttcacagggttggacctttaacaagaaagcttcaagggctcaggaatgaccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cccaagcttcacagggttggacctttaacaagaaagcttcaagggctcaggaatgaccag 270
Query: 301 ccattgagccctctgtgaggccatgcttacacgtcccttcagatgccaactttgttttta 360
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 269 ccattgagccctctgtgaggccatgcttacacgtccctaaagatgccaactttgttttta 210
Query: 361 atcaaatca 369
|||||||||
Sbjct: 209 atcaaatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
