Query= MSMg01no343_p24.b1 MSMg01no343_p24.b1 CHROMAT_FILE:
MSMg01no343_p24.b1 PHD_FILE: MSMg01no343_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:03 2005
(325 letters)
>mm_chr1_171031498_171032221
Length = 724
Score = 571 bits (295), Expect = e-167
Identities = 314/325 (96%), Gaps = 9/325 (2%)
Strand = Plus / Minus
Query: 1 attccctggcgaggcccaatactatttgtacattttctgtctttctgggaagccatactg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 520 attccctggcgaggcccaatactatttgtacattttctgtcattctgggaagccatactg 461
Query: 61 tcttgtatatctatgtaccttgggcctttatcatgctattgtttgggttcacaatgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tcttgtatatctatgtaccttgggcctttatcatgctattgtttgggttcacaatgccct 401
Query: 121 ccaaaaattcaagcatagactatcttagaccctggtcccatggtgttcagagatgaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ccaaaaattcaagcatagactatcttagaccctggtcccatggtgttcagagatgaatgg 341
Query: 181 aatctacaaaccccaaccttacctatgcattaattttttgattatttatacatgagtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aatctacaaaccccaaccttacctatgcattaattttttgattatttatacatgagtgaa 281
Query: 241 ctactta----ttttttaatgaaaccgaagaaggtgagagctagttggaggaggtaggag 296
||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ctactgagagg-----taatgaaaccgaagaaggtgagagctagttggaggaggtaggag 226
Query: 297 aatatttgttcctacctgtctctgt 321
|||||||||||||||||||||||||
Sbjct: 225 aatatttgttcctacctgtctctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_p24.g1 MSMg01no343_p24.g1 CHROMAT_FILE:
MSMg01no343_p24.g1 PHD_FILE: MSMg01no343_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:03 2005
(400 letters)
>mm_chr1_170863925_170864724
Length = 800
Score = 774 bits (400), Expect = 0.0
Identities = 400/400 (100%)
Strand = Plus / Plus
Query: 1 tccattccaggcaatggaagtaggccagaatgtctaagctatgaatgaactacctatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccattccaggcaatggaagtaggccagaatgtctaagctatgaatgaactacctatgtt 260
Query: 61 acagaaatgaatgttctgagcacttagaatgagcaggtaagtggagggtatgggactccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaaatgaatgttctgagcacttagaatgagcaggtaagtggagggtatgggactccg 320
Query: 121 catactcacaacaatgagtatgaattagaatgttagcaagagtgtagaagtgagaaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catactcacaacaatgagtatgaattagaatgttagcaagagtgtagaagtgagaaagtt 380
Query: 181 taagtaaggaatttaaatatcattctgaagtcaagaagcaaacaatgaaacatttgccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagtaaggaatttaaatatcattctgaagtcaagaagcaaacaatgaaacatttgccac 440
Query: 241 tgtgtaaaaatattttgagtttaagggaataagaaagtaggataccaagaagaagaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtaaaaatattttgagtttaagggaataagaaagtaggataccaagaagaagaatga 500
Query: 301 agttaaaagtgccttgcagaatgataaatttggcagtgattttataatgttgcttcctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttaaaagtgccttgcagaatgataaatttggcagtgattttataatgttgcttcctcc 560
Query: 361 tacctactatcatttgctctcaaagaattatgagataaat 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacctactatcatttgctctcaaagaattatgagataaat 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
