Query= MSMg01no344_d17.b1 MSMg01no344_d17.b1 CHROMAT_FILE:
MSMg01no344_d17.b1 PHD_FILE: MSMg01no344_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:21 2005
(453 letters)
>mm_chr1_70469710_70470558
Length = 849
Score = 727 bits (376), Expect = 0.0
Identities = 426/444 (95%), Gaps = 6/444 (1%)
Strand = Plus / Minus
Query: 11 cagagtgtttctacaagcttgcaatcccaccagcaatggaggagtgttcctctttctcca 70
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 cagagtggttgtacaagcttgcaatcccaccagcaatggaggagtgttcctctttctcca 734
Query: 71 catcctcgccagcatttgctaccacctgaattttttatcttagccattctgactggtgtg 130
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 733 catcctcgccagcatttgctgccacctgaattttggatcttagccattctgactggtgtg 674
Query: 131 aggtggaatctcagggttgttttgtaagccaaactactttttgttgcagatatatggaat 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aggtggaatctcagggttgttttgtaagccaaactactttttgttgcagatatatggaat 614
Query: 191 tataatatactttgcatattcatatgatacccagaggtttttatcaaaggggaaaacaga 250
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 613 tataatatactttacatattcatatgatacccagaggtttttatcaaagggaaaaacaga 554
Query: 251 cagaaactttctccataacttttaaatttatgttaaaagtttggagtgattcagctcttc 310
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 553 cagaaactttctccataacttttaaatttatgtt---agtttggaatgattcagctcttc 497
Query: 311 tgacctgatcacatttgaaacccaaattcatgttataaaatcaaagttccctgtgagtac 370
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 496 tgacctgatcacatttgaaacccaaattcatgttataaaatcaaagttccctgtgactac 437
Query: 371 caaaattcatttcatccgaatttgaaatcctctctatcacttaaaaaataccattttttt 430
||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||
Sbjct: 436 caaaattcatttcatccgattttgaaatcgtctctatcactt-aaaaataccatttttt- 379
Query: 431 atgatatcacctc-ggactctatt 453
||||||||||| | ||||||||||
Sbjct: 378 atgatatcacccctggactctatt 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 849
Length adjustment: 10
Effective length of query: 443
Effective length of database: 839
Effective search space: 371677
Effective search space used: 371677
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_d17.g1 MSMg01no344_d17.g1 CHROMAT_FILE:
MSMg01no344_d17.g1 PHD_FILE: MSMg01no344_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:21 2005
(434 letters)
>mm_chr1_70268145_70268978
Length = 834
Score = 762 bits (394), Expect = 0.0
Identities = 424/434 (97%)
Strand = Plus / Plus
Query: 1 ttggacacgatggtgctacactgttcattgagacaagtcattcagagatatatttgatac 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggacacgatggtgctacaccgttcattgagacaagtcattcagagatatatttgatac 260
Query: 61 atttgacagagtatgttggctacccaactactgtaaaatcctagctttcctagaaaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 atttgacagagtatgttggctacccaactactgtaaaatcctagctttcatagaaaagtt 320
Query: 121 actccctcaaaacatgggaatctcctcagccagcaggtgaggagaaagagtggagacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actccctcaaaacatgggaatctcctcagccagcaggtgaggagaaagagtggagacata 380
Query: 181 tcataggagcctctaggacagagaatgacttagctgaagcacaattggcaaaggagtgca 240
|||||||||||||| ||||||||||||||||||| || |||||| |||||||||||||||
Sbjct: 381 tcataggagcctctgggacagagaatgacttagcagacgcacaactggcaaaggagtgca 440
Query: 241 gcataatgctctctagaggggttgtggaaggttccgggctaggactttcagacatcacct 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcataatgttctctagaggggttgtggaaggttccgggctaggactttcagacatcacct 500
Query: 301 ggctttatctcacttaggttgtttagttgcagacctagcaaaaggccaagatgatatcct 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ggctttatctcacttaggttgtttagttgcagacctagcaaaaggctgagatgatatcct 560
Query: 361 gtcatgtggtagacctatggagataaaatatttcaaagtcctaccaaatctgactttgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcatgtggtagacctatggagataaaatatttcaaagtcctaccaaatctgactttgct 620
Query: 421 gaatgacgactggg 434
|||||| |||||||
Sbjct: 621 gaatgatgactggg 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
