Query= MSMg01no344_g05.b1 MSMg01no344_g05.b1 CHROMAT_FILE:
MSMg01no344_g05.b1 PHD_FILE: MSMg01no344_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:33 2005
(244 letters)
>mm_chr1_94727359_94728006
Length = 648
Score = 424 bits (219), Expect = e-123
Identities = 240/249 (96%), Gaps = 6/249 (2%)
Strand = Plus / Minus
Query: 1 tccatccttcaccttaccggcttgctctcttagcgcttctactactcagtcctggtccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tccatccttcaccttaccggcttgctctcttagcgcttctactactcagtcctggtccgg 389
Query: 61 tcacttccctactcacctgccgcccccccaccccccagcaacaactcctacatccatacg 120
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 388 tcacttccctactcacctgctg-ccccccaccccccagcaacaactcctacatccatacg 330
Query: 121 ccctttctagccgcccctgagcggctccagttctcgtctgacgtgttttggagga-tatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 329 ccctttctagccgcccctgagcggctccagttctcgtctgacgtgttttggaggaggatg 270
Query: 180 agggggctgaaaactggcc----aaaaaaagaaaaaaactagccttcatcagctcagatg 235
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 269 agggggctgaaaactggccaaaaaaaaaaaaaaaaaaactagccttcatcagctcagatg 210
Query: 236 acttcagtt 244
|||||||||
Sbjct: 209 acttcagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 648
Length adjustment: 9
Effective length of query: 235
Effective length of database: 639
Effective search space: 150165
Effective search space used: 150165
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no344_g05.g1 MSMg01no344_g05.g1 CHROMAT_FILE:
MSMg01no344_g05.g1 PHD_FILE: MSMg01no344_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:33 2005
(122 letters)
>mm_chr1_94545155_94545673
Length = 519
Score = 203 bits (105), Expect = 3e-57
Identities = 116/121 (95%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1 gagcgtgttgagctgacttggcaaagcctgccaaggtggaagtccctccaccacgccacc 60
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 201 gagcgtgttgagctgacttggcaaagcctgtcaaggtggaagtccctccac---gccacc 257
Query: 61 acagctgatgcgggtgtggcagctttaacaggaaatctagaagggcctggggcgagacag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 258 acagctgatgcgggtgtggcagctttaacaggaaatctagaagggcctggggtgagacag 317
Query: 121 c 121
|
Sbjct: 318 c 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 519
Length adjustment: 8
Effective length of query: 114
Effective length of database: 511
Effective search space: 58254
Effective search space used: 58254
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
