NGGGAACGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGA
AAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACC
CTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGG
AGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATT
TTTGTTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGG
TTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCT
CCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCT
CCACTATGTTCATAGCAGCCTTATTTATAATAGTCAGAAGCTGGAAAGAA
CCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTA
CACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCC
TAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAT
TCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGGATATAACCC
CCAACCTAGGATACCCAGATATAAAAATAATTTGCTAAACCCTGAAACTC
CCCAAAAAGAAGACTGGAGGGTGGAACTAATGCCCCCCCTAAATTTGGGA
ACAAN

NNNNNNTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTATCCTGATGTAGT
ATAGCTCTGTGGATGCATGGGGTAAGCCGTGTAATGCATGCCCACTAGGC
ATTGGTGGGTGGTCATAGATATTTATCATTGTCTACCTACATGGTCATCC
TGCAGGTCTGGTTACAAAAGTGCCTATAGGGCCAAGGACAGTCCTAATCA
GGTGCCCTGATATTCAAAGGACTGTGATGTCAGCTTAGTCTCATGTTATT
GCTGTCTGCACTCATTGGGGTTCTCAGTTTCAGTAAAGTTGCTAATTAGG
ACTATGCCTTCAATGTAAAGTTGTGTTATCTCATAGGATACTTATTATGG
CTGAGTTAACTCTGGTCTGGATGCATTGGTAGCCTGAAAAGACTGAAACA
TCATGTTCCAGAGGATGTCAGGGTTTTCATTATTGAATCTTAGTGTTGTC
CTTGTAGCTTGGGTTGGGGAATTGTTAGGGGAAGAAGGNNCTCNNNCTTT
TGTTTGGATTATTGTCTGAACCTTCTATATGGAGCAAATGGGCGGTTATC
TATTAAAAAGATATATTGAAAATTTGAATCTTTTATCTTCATAAAACCCT
TGCATTTTTTAACTTTTTTATTTTTTCTCATCTTTAATCTTTATTCTTTT
TCCTTTTTTTGCCTTTTATTTTATCTTTTCTTTTCTCTCATCAATTTAAT
TCATTG

Query= MSMg01no345_f08.g1 MSMg01no345_f08.g1 CHROMAT_FILE:
MSMg01no345_f08.g1 PHD_FILE: MSMg01no345_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:46 2005
         (442 letters)



>mm_chr1_50094971_50095812
          Length = 842

 Score =  824 bits (426), Expect = 0.0
 Identities = 438/442 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttatcctgatgtagtatagctctgtggatgcatggggtaagccgtgtaatgcatgccca 60
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 642 cttatcctgatatagtatagctctgtggatgcatggggtaagccatgtaatgcatgccca 583

                                                                       
Query: 61  ctaggcattggtgggtggtcatagatatttatcattgtctacctacatggtcatcctgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctaggcattggtgggtggtcatagatatttatcattgtctacctacatggtcatcctgca 523

                                                                       
Query: 121 ggtctggttacaaaagtgcctatagggccaaggacagtcctaatcaggtgccctgatatt 180
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 522 ggtctggttacaaaagtgcctatagggccagggacagtcctaatcaggtgccctgatagt 463

                                                                       
Query: 181 caaaggactgtgatgtcagcttagtctcatgttattgctgtctgcactcattggggttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 caaaggactgtgatgtcagcttagtctcatgttattgctgtctgcactcattggggttct 403

                                                                       
Query: 241 cagtttcagtaaagttgctaattaggactatgccttcaatgtaaagttgtgttatctcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cagtttcagtaaagttgctaattaggactatgccttcaatgtaaagttgtgttatctcat 343

                                                                       
Query: 301 aggatacttattatggctgagttaactctggtctggatgcattggtagcctgaaaagact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aggatacttattatggctgagttaactctggtctggatgcattggtagcctgaaaagact 283

                                                                       
Query: 361 gaaacatcatgttccagaggatgtcagggttttcattattgaatcttagtgttgtccttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaaacatcatgttccagaggatgtcagggttttcattattgaatcttagtgttgtccttg 223

                                 
Query: 421 tagcttgggttggggaattgtt 442
           ||||||||||||||||||||||
Sbjct: 222 tagcttgggttggggaattgtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)