Query= MSMg01no346_j11.b1 MSMg01no346_j11.b1 CHROMAT_FILE:
MSMg01no346_j11.b1 PHD_FILE: MSMg01no346_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:19 2005
(342 letters)
>mm_chr1_119434386_119435127
Length = 742
Score = 567 bits (293), Expect = e-166
Identities = 326/337 (96%)
Strand = Plus / Minus
Query: 6 aattccacaccaccactatatgacatcaagcttatgaagcctgaaggatcagttttttta 65
|||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 542 aattccacacaaggactatatgacatcaagcttatgaggcctgaaggatcagttttttta 483
Query: 66 gctatagctttttgtgagactcagtagaatcaactttctcataaagtgagacataataca 125
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 482 gctataactttttgtgagactcagtagaatcaactttctcataaagtgggacataataca 423
Query: 126 ctaaggtatgattaacaaacgtatgcctttgcaatatcaatttcataatcaaaccaacaa 185
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 422 ctaaggtatgattaacaaacgtatgcctttgcaatatcaatctcttaatcaaaccaacaa 363
Query: 186 ggcaatgaatgggccctgttctgtgggctgtattcccagagtgcaatagggaagtgtgca 245
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggcaatgagtgggccctgttctgtgggctgtattcccagagtgcaatagggaagtgtgca 303
Query: 246 gagaccatgggggtaactgtgcagtggttctggatcaaaatgaggtatgtacacagcagg 305
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gagaccatggggataactgtgcagtggttctggatcaaaatgaggtatgtacacagcagg 243
Query: 306 ggttttccatgggtattccaccacactttggttgaga 342
|||||||||||||||||||||||||||||| ||||||
Sbjct: 242 ggttttccatgggtattccaccacactttgcttgaga 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_j11.g1 MSMg01no346_j11.g1 CHROMAT_FILE:
MSMg01no346_j11.g1 PHD_FILE: MSMg01no346_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:20 2005
(339 letters)
>mm_chr1_119287797_119288535
Length = 739
Score = 572 bits (296), Expect = e-168
Identities = 329/340 (96%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 cacacccctaagccccttacctcataaaaacacctagctttcgagcctcatggcca-aca 59
||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | |||
Sbjct: 201 cacacccctaagccccttacctcataaaaacccctagctttcgagcctcgtggc-agaca 259
Query: 60 tccgttatctcttgtgtgggatgcatgtcagtccagagctccgtcattaaactaccttgt 119
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tccgttatctcctgtgtgtgatgcatgtcagtccagagctccgtcattaaactaccttgt 319
Query: 120 gtaattgcatcaaggccttttcgtgattctttgggtgcccaccgaattggaaattgagtg 179
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtaattacatcaaggccttttcatgattctttgggtgcccaccgaattggaaattgagtg 379
Query: 180 ggggtttccccccactaggttctatcagtaaatttccacaggcagccattcccacatgtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggggtttccccccactaggttctatcagtaaatttccacaggcagccattcccacatgtg 439
Query: 240 gttcaatgacactgtctggttgggaccctccctctaagtcattaagtcgtttggtttaag 299
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 440 gttcaatgccactgtctggttgggaacctccctctaagtcattaagtcgtttggtttaag 499
Query: 300 gagtggcaatgaccaggttgatgatcactatgacccacaa 339
| ||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggtggcaatgaccaggttgatgatcactatgacccacaa 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
