NNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAAATCATGTTTCAGCCTGAATTCAGGTATTAAAATGTACAA
CTAAAGAAACTCTGTCATATTCTGAAACCACTTTTCCTGCTTGGTGGCAG
CATACACTGGGGAGAGGCTGTGGTTGGCTTCTCTGTTCTTTCCATCCAAA
TCTCTTTCCCTCCCTTTGCATGCTTGAACTAAGAGGGAGAAATGCTAAGG
AAATACTGAGTTCTTATGTGAACAAGTTACCCGTGAGAGCTGACTAAATA
CTCCTTGAGACCAGTGAAGGTTTACAGCAATTGGTGTTTCTTGTGGATGC
CTTTTGTTGACTGGAGATTTCCTGATGAGTGTCTCTCTTTGGCAATTCAG
ATGCTCTGGGAAATCATCCCTTCCCGCCACCTCTTGAAATGACTTCCTCC
ACTACCAGAAAAATGTCATCCCCAGCCTTCTGTCTTTCAAGGTTGCTTTG
CTTCTTGAGAAAGCCGTGCATAACCCACAAACATCTACATAGCTGTGCCT
TCGGCTGCTATCTCTGTTGTCTGGTTAGAGGCACTCTAAGTTTCCCTGTG
ATTCTTGCAGACTCTTCCAGTTGGAATGAACAAGTGGGCCTCTACCCTTC
CCGCTGTTTTCCNAGGNTTCCACGCATCACTGGCGACCTGGTATNCNNAG
GGGTATCCCCTGAAAAAAAATTTCCCCTCGCCATCTCTTTTCTTTTACAC
CTTATTCCTTTTTGCTAGAGGC

NNNAACGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAAT
GGCAGAGAAACACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAA
TGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCT
AAGATCAAAAATTCAGGTGACAGCAGATGCTGGCATGGATGTGGAGAAAG
AGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCT
GGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAG
GATCCAGCAATACCTCTCCTAGGCATATATCCAGAAGATGCCCCAACTGG
TAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGGAAACAACCCAGATGCCCCTCAACAGAGGAATGGATACAG
AAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAA
TGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCC
TGAGTGAGGTAACACATTTACTAAGGAACTCACACAATATGTACTCACTG
ATAAGTGGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAA
TTTCCTAAACCCATGAAACTCTAAAATGAGAACTGAAGGGTGGAACCTAT
GGCCCTCN

Query= MSMg01no347_p23.b1 MSMg01no347_p23.b1 CHROMAT_FILE:
MSMg01no347_p23.b1 PHD_FILE: MSMg01no347_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:09 2005
         (508 letters)



>mm_chr1_145436820_145437727
          Length = 908

 Score =  905 bits (468), Expect = 0.0
 Identities = 495/504 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaaatcatgtttcagcctgaattcaggtattaaaatgtacaactaaagaaactct 64
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gaattcaaatcatgaatcagcctgaattcaggtattaaaatgtacaactaaagaaactct 649

                                                                       
Query: 65  gtcatattctgaaaccacttttcctgcttggtggcagcatacactggggagaggctgtgg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gtcatattctgaaaccacttttcctgcttggtggcagcatacactggggagaggctgtgg 589

                                                                       
Query: 125 ttggcttctctgttctttccatccaaatctctttccctccctttgcatgcttgaactaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ttggcttctctgttctttccatccaaatctctttccctccctttgcatgcttgaactaag 529

                                                                       
Query: 185 agggagaaatgctaaggaaatactgagttcttatgtgaacaagttacccgtgagagctga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 agggagaaatgctaaggaaatactgagttcttatgtgaacaagttacccgtgagagctga 469

                                                                       
Query: 245 ctaaatactccttgagaccagtgaaggtttacagcaattggtgtttcttgtggatgcctt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ctaaatactccttgagaccagtgaaggtttacagcaattggtgtttcttgtggatgcctt 409

                                                                       
Query: 305 ttgttgactggagatttcctgatgagtgtctctctttggcaattcagatgctctgggaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttgttgactggagatttcctgatgagtgtctctctttggcaattcagatgctctgggaaa 349

                                                                       
Query: 365 tcatcccttcccgccacctcttgaaatgacttcctccactaccagaaaaatgtcatcccc 424
           ||||| ||||| |  ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 348 tcatctcttcctggtacctcttgaaaagacttcctccactaccagaaaaatgtcatcccc 289

                                                                       
Query: 425 agccttctgtctttcaaggttgctttgcttcttgagaaagccgtgcataacccacaaaca 484
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 288 agccttctgtctttcaaggttgctttgcttcttgagaaagctgtgcataacccacaaaca 229

                                   
Query: 485 tctacatagctgtgccttcggctg 508
           ||||||||||||||||||| ||||
Sbjct: 228 tctacatagctgtgccttccgctg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)