Query= MSMg01no348_n16.b1 MSMg01no348_n16.b1 CHROMAT_FILE:
MSMg01no348_n16.b1 PHD_FILE: MSMg01no348_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:17 2005
(624 letters)
>mm_chr1_164987232_164988255
Length = 1024
Score = 1125 bits (582), Expect = 0.0
Identities = 612/622 (98%), Gaps = 3/622 (0%)
Strand = Plus / Plus
Query: 5 gaattccctgtacccagagttggttgtaagtcacccaacatatgagtactgggaatttaa 64
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccctggatccagagttggttgtaagtcacccaacatatgagtactgggaatttaa 263
Query: 65 atctggctctctgtaagagcagtacttacttaaccactgagccatttctctggcccttat 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctctggctctctgtaagagcagtacttacttaaccactgagccatttctctggcccttat 323
Query: 125 tttggagcttatgtctgctctttataaataa-aaaatcccgggctggtgagatggctcag 183
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 324 tttggagcttatgtctgctctttataaataagaaaaacccgggctggtgagatggctcag 383
Query: 184 tgcttaagaacactggctgctcttccagagggtctgaattcaatttgcagcaacatggtg 243
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcttaagaacactgactgctcttccagagggtctgaattcaatttgcagcaacatggtg 443
Query: 244 gctcaccagcatctataaagggatctgatgccctcttctggcatgcaggtgtacacgcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctcaccagcatctataaagggatctgatgccctcttctggcatgcaggtgtacacgcag 503
Query: 304 acagagcacttgtacattaaaacaaaattcataaataaacaagaaaaacttgtatgtttg 363
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 acagagcacttgtacattaaaacaaaattcataaataaataagaaaaacttgtatgtttg 563
Query: 364 agggttttctcaagaaaaaaaaaagttgacaatggacaaaaaatacattctctttttgaa 423
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 564 agggttttctcaagaaaaaaaaa-gttgacaatggacaaaaaatacattctctttttgaa 622
Query: 424 aaaaa-gtttgggtgagatttgtaacaatcacaatttaaccccttctcccaatagtggca 482
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aaaaaagtttgggtgagatttgtaacaatcacaatttaaccccttctcccaatagtggca 682
Query: 483 ttaatacagtcttgaggtcctactgtgtgttaagcattgcacaaagtaacatgtaacata 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttaatacagtcttgaggtcctactgtgtgttaagcattgcacaaagtaacatgtaacata 742
Query: 543 tgatcatatttaaaacatgtacagacaacctagatgatgtaagaataaatttcttttcag 602
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 743 tgatcatatttaaaacatgtacagacaacctagatgatgtaaaaataaatttcttttcag 802
Query: 603 aaaaagaaattgggcctgacta 624
||||||||||||||||||||||
Sbjct: 803 aaaaagaaattgggcctgacta 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_n16.g1 MSMg01no348_n16.g1 CHROMAT_FILE:
MSMg01no348_n16.g1 PHD_FILE: MSMg01no348_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:17 2005
(572 letters)
>mm_chr1_165096916_165097886
Length = 971
Score = 1067 bits (552), Expect = 0.0
Identities = 567/572 (99%), Gaps = 1/572 (0%)
Strand = Plus / Minus
Query: 1 ttttgattttctgatgaaggaatatgggacttggaatgacatcctcagaaggctcagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ttttgattttctgatgaaggaatatgggacttggaatgacatcctcagaaggctcagaga 712
Query: 61 aactctctgccaatccactcaactacagctccgagtcagtgtgtttccaacatgtaggca 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aactctctgccagtccactcaactacagctccgagtcagtgtgtttccaacatgtaggca 652
Query: 121 ctgggattccaaaattaatattttgaatattcaacatgtccctgagggatagtaaaggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ctgggattccaaaattaatattttgaatattcaacatgtccctgagggatagtaaaggcc 592
Query: 181 cttcccacttttgtttctcctgcaaaacaagtcaggatgaggtctttgctgatgagactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cttcccacttttgtttctcctgcaaaacaagtcaggatgaggtctttgctgatgagactc 532
Query: 241 ttgtcttcctcctgtccagctgtgctccatccctgtggctttcctcttagaaatcccaaa 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttggcttcctcctgtccagctgtgctccatccctgtggctttcctcttagaaatcccaaa 472
Query: 301 atagtcaagaaggcttgtttccaagctagacttgacctggcctggctggctggcgtccaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 471 atagtcaagaaggcttgtttccaagctagacttgacctggcctggctggctggcttccaa 412
Query: 361 aggggatttttatgaaaatattagtttttctctatagagattttttttattagaaccctc 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 411 aggggatttttatgaaaatattagtttttctctatagaga-tttttttattagaaccctc 353
Query: 421 agaaagctgtgcctctcttctttgtcagtctttcaaaattctagcatcttcctttgctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agaaagctgtgcctctcttctttgtcagtctttcaaaattctagcatcttcctttgctta 293
Query: 481 cttcatcaaggatatgagctttcttctttgggcctaatattagtttctgaaatggacaga 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 292 cttcatcaaggatatgagctttctcctttgggcctaatattagtttctgaaatggacaga 233
Query: 541 gggaaatagacaggcttggtgtctttgccaca 572
||||||||||||||||||||||||||||||||
Sbjct: 232 gggaaatagacaggcttggtgtctttgccaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 971
Length adjustment: 10
Effective length of query: 562
Effective length of database: 961
Effective search space: 540082
Effective search space used: 540082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
