Query= MSMg01no350_e08.b1 MSMg01no350_e08.b1 CHROMAT_FILE:
MSMg01no350_e08.b1 PHD_FILE: MSMg01no350_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:09 2005
(469 letters)
>mm_chr1_154395732_154396600
Length = 869
Score = 876 bits (453), Expect = 0.0
Identities = 462/465 (99%)
Strand = Plus / Minus
Query: 5 gaattcataacatttgtaatacctctaacacaggaaaccagcaactcactgtaatactga 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gaattcataacagctgtaatacctctaacacaggaaaccagcaactcactgtaatactga 610
Query: 65 tatttaaatgccttttatgtctccgtcactccccacacaggaatgtagaatcctgaagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tatttaaatgccttttatgtctccgtcactccccacacaggaatgtagaatcctgaagaa 550
Query: 125 tttttcctccttgagggccatcgtttccgcactgcagtctaattccatctatcggttgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tttttcctccttgagggccatcgtttccgcactgcagtctaattccatctatcggttgaa 490
Query: 185 aaaggcttgggctgctgtcccgaagtaagttccccagtgcctgctctgttgttctggctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aaaggcttgggctgctgtcccgaagtaagttccccagtgcctgctctgttgttctggctc 430
Query: 245 gggtgatgggttgcttcgtctgtcccatgcgtccttaccatcagagtgcatatcatgtga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gggtgatgggttgcttcgtctgtcccatgcgtccttaccatcagagtgcatatcatgtga 370
Query: 305 caggggaaacatggttgaaaccctctgtgtgtaccaggaagagtgcatcaatgaatttcg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caggggaaacatggttgaaaccctctgtgtgtaccaggaagagtgcatcaatgaatttcg 310
Query: 365 agggtgggcagttacagaaaccacactccttctctgtgtgccagagccatggtcaccagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agggtgggcagttacagaaaccacactccttctctgtgtgccagagccatggtcaccagg 250
Query: 425 cctgcgatgctgtggaggtgtgcttgttatcgggatcttgaggga 469
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 249 cctgcgatgctgtagaggtgtgcttgttatcgggatcttgaggga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_e08.g1 MSMg01no350_e08.g1 CHROMAT_FILE:
MSMg01no350_e08.g1 PHD_FILE: MSMg01no350_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:09 2005
(454 letters)
>mm_chr1_154367810_154368663
Length = 854
Score = 797 bits (412), Expect = 0.0
Identities = 447/464 (96%), Gaps = 11/464 (2%)
Strand = Plus / Plus
Query: 1 tacagaaaagcccagaaacaacagcaaagagttaggggtgggtagtagcttcagacactt 60
||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 192 tacagaaaa-cccagaaacaatagcaaagagttaggggtgggtagcagcttcagacactt 250
Query: 61 gatcta-agtaaggcgagacatagcttgtctccctggcacacctaaataccaccaccagg 119
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatctactgtaaagcgagacatagcttgtctccctggcacacctaaataccaccaccagg 310
Query: 120 gggca---------gatctgtggataagggcacttgctgtgtgagcatgagccccgtccc 170
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gggcatgagaggcagatctgtggataagggcacttgctgtgtgagcatgagccccgtccc 370
Query: 171 ctttacccccctgtcagggttgcttgggcttgctggccaccagccttgcttcatgctcag 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctttacccccctgtcagggttgcttgggcttgctggccaccagccttgcttcatgctcag 430
Query: 231 agagagcaggacacattttgtactgttctggccacacacacatacactcatacaaatatg 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agagagcaggacacattttgtactgttctggccacacacacatacactcatacaaatatg 490
Query: 291 tgcatatgcccctgccatcactaggatccaaatgaaaaggaagacatttcatgacctttc 350
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 491 tgcatatgcccctgccatcactaggatccaaatgaaaaggaagacacttcatgacctttc 550
Query: 351 tgctgtcagcacctgagcagggtgtgcgtgtggctggcacctgctgtcgtggagaacacg 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 551 tgctgtcagcacctgagcagggtgtgcgtgtggctggcacctgctgtcgtggagagcacg 610
Query: 411 cctacctttgtcctccgagatgacctgcaccagctcatactcct 454
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cctacctttgtcctccgagatgacctgcaccagctcatactcct 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
