Query= MSMg01no350_e09.b1 MSMg01no350_e09.b1 CHROMAT_FILE:
MSMg01no350_e09.b1 PHD_FILE: MSMg01no350_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:09 2005
(328 letters)
>mm_chr1_97551935_97552662
Length = 728
Score = 611 bits (316), Expect = e-179
Identities = 325/328 (99%)
Strand = Plus / Plus
Query: 1 ctccacaaacggtaacatctactatcaaagtggcatcatagtcttccatactcattaatt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ctccacaaacggtaacatctactatcaaagtggcaccatagtcttccatactcattaatt 260
Query: 61 aactactgcttaattacctggggggaaatgagaagagcttgacacctatagtttagcact 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactaccgcttaattacctggggggaaatgagaagagcttgacacctatagtttagcact 320
Query: 121 ttttgtttgctgtgaagatgacaaggttgtcttgtagataaagactgcacggatgtggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgtttgctgtgaagatgacaaggttgtcttgtagataaagactgcacggatgtggtt 380
Query: 181 aaatcatcgaagagggtgatgtaaccgtttccctttgaacaaaactgaaatgggctgtca 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatcatcgaagagggtgatgtgaccgtttccctttgaacaaaactgaaatgggctgtca 440
Query: 241 cagatgcgtttaaagattgtgctcaaaagcagtagcgtgtttggcagcttgaaatgaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagatgcgtttaaagattgtgctcaaaagcagtagcgtgtttggcagcttgaaatgaata 500
Query: 301 gattggagctgtaggtattaaagaagat 328
||||||||||||||||||||||||||||
Sbjct: 501 gattggagctgtaggtattaaagaagat 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_e09.g1 MSMg01no350_e09.g1 CHROMAT_FILE:
MSMg01no350_e09.g1 PHD_FILE: MSMg01no350_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:09 2005
(466 letters)
>mm_chr1_97677908_97678774
Length = 867
Score = 872 bits (451), Expect = 0.0
Identities = 463/467 (99%), Gaps = 1/467 (0%)
Strand = Plus / Minus
Query: 1 aacattatctcaattgagaaaacaaagcccaatgaagcagacaagacaattagtatttct 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 667 aacattatctcaattgagaaaacaaagcccaatgaagcagacaagacaatgagtatttct 608
Query: 61 ggcacatttcagtaacaaactttgaggctaaaacaagatattgcttatcaattattattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ggcacatttcagtaacaaactttgaggctaaaacaagatattgcttatcaattattattg 548
Query: 121 agggcattgaaaacttactgaaaataaatgaagcaagtgtcttctaaaacattttaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agggcattgaaaacttactgaaaataaatgaagcaagtgtcttctaaaacattttaatta 488
Query: 181 aaaatgattacttttcttctaaagattgtgttatttctccatttatagacggcatcttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aaaatgattacttttcttctaaagattgtgttatttctccatttatagacggcatcttat 428
Query: 241 taacagagtctcgattttgcaatgttctgttagccattctttctttctttttctttaa-t 299
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 427 taacatagtctcgattttgcaatgttctgttagccattctttctttctttttctttaatt 368
Query: 300 tttttttgccacgtgttctgtgtttgaataaaatattaaaagattcctaacttttcataa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tttttttgccacgtgttctgtgtttgaataaaatattaaaagattcctaacttttcataa 308
Query: 360 agatatgtgctgtggaacacagcagggagagtgactcttaaaaaatatatatgtggtctg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agatatgtgctgtggaacacagcagggagagtgactcttaaaaaatatatatgtggtctg 248
Query: 420 gatagatatagaaaatagttattacaagaatttttcagttatgtact 466
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 247 gatagatataggaaatagttattacaagaatttttcagttatgtact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 867
Length adjustment: 10
Effective length of query: 456
Effective length of database: 857
Effective search space: 390792
Effective search space used: 390792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
