Query= MSMg01no351_i08.b1 MSMg01no351_i08.b1 CHROMAT_FILE:
MSMg01no351_i08.b1 PHD_FILE: MSMg01no351_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:47 2005
(534 letters)
>mm_chr1_131176404_131177336
Length = 933
Score = 992 bits (513), Expect = 0.0
Identities = 525/529 (99%), Gaps = 1/529 (0%)
Strand = Plus / Minus
Query: 5 gaattccttcttgttacgcaattgggccagtgctctatcttgggtgaacagatgcttttt 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gaattccttcttggtaggcaattgggccagtgctctatcttgggtgaacagatgcttttt 673
Query: 65 tttttttctttctcatatttccctagaaaaggtcataaaaaagtgccaaggttccctcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tttttttctttctcatatttccctagaaaaggtcataaaaaagtgccaaggttccctcag 613
Query: 125 tcccagcatcctaatatgaaaaaaaaaatgacactgaaaatgtttcctgctttgaaatag 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcccagcatcctaatatg-aaaaaaaaatgacactgaaaatgtttcctgctttgaaatag 554
Query: 185 cagttaataggattagacaaagtggtcctcatacactcagcctgatgtgcagcatgtcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cagttaataggattagacaaagtggtcctcatacactcagcctgatgtgcagcatgtcag 494
Query: 245 aggtcattgataactggcagccactgcccttgcccacctgtgtgctgttagtcctctccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 493 aggtcattgataactggcagccactgcccttgcccacctgtgtgctgttagtcctcttcc 434
Query: 305 agtatgtcctcaaatggctgttgtcacccaggccccctgtcactgtctcctccacagcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agtatgtcctcaaatggctgttgtcacccaggccccctgtcactgtctcctccacagcat 374
Query: 365 tttccagaactcacagtagagaggactgccctttcctactcaaagccagtgccatcagaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tttccagaactcacagtagagaggactgccctttcctactcaaagccagtgccatcagaa 314
Query: 425 ctccaccagtagatgctaatgaggaaacagatttaatcaaataataaaattagattttac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctccaccagtagatgctaatgaggaaacagatttaatcaaataataaaattagattttac 254
Query: 485 cccctgagttgtttgggcagagaaaggactttatgaactactctaatca 533
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cccctgagttgtttgggcagagaaaggactttatgaactactctaatca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 933
Length adjustment: 10
Effective length of query: 524
Effective length of database: 923
Effective search space: 483652
Effective search space used: 483652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_i08.g1 MSMg01no351_i08.g1 CHROMAT_FILE:
MSMg01no351_i08.g1 PHD_FILE: MSMg01no351_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:47 2005
(485 letters)
>mm_chr1_130970787_130971671
Length = 885
Score = 930 bits (481), Expect = 0.0
Identities = 484/485 (99%)
Strand = Plus / Plus
Query: 1 agtaatgtactgtagaacatgatacacaacccatttccctaggcttttctgtaattatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaatgtactgtagaacatgatacacaacccatttccctaggcttttctgtaattatct 260
Query: 61 ttgggagataaatcacacacacatgagaaggcaaggttattggatgagtgttatggtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgggagataaatcacacacacatgagaaggcaaggttattggatgagtgttatggtatt 320
Query: 121 tatttgtcctggcatttggggaggtaatgactataaaattcacttattgagcacctgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttgtcctggcatttggggaggtaatgactataaaattcacttattgagcacctgaaa 380
Query: 181 agtgtcaggtaccacaaggataacagactagctgtgtttcttctttgcatctttgtatcc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 agtgtcaggtaccacaaggataacagactagctgtgtttcttctttgcatctttgtattc 440
Query: 241 caggttatagttactggaccaaagatgggcaactgactccatttcaatacactttcagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggttatagttactggaccaaagatgggcaactgactccatttcaatacactttcagga 500
Query: 301 tttgggatggcaactgtggtttatactcagtgactattaatcaaagaacttggaagatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgggatggcaactgtggtttatactcagtgactattaatcaaagaacttggaagatgt 560
Query: 361 tttctgtggtgtggaagagaggatatcctctcccagtgaaggagatgaacatatggaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttctgtggtgtggaagagaggatatcctctcccagtgaaggagatgaacatatggaaga 620
Query: 421 gactttggggtcaggaggtggtaataggaacatgtgtaattccagtcaaaaggaagaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gactttggggtcaggaggtggtaataggaacatgtgtaattccagtcaaaaggaagaact 680
Query: 481 tctca 485
|||||
Sbjct: 681 tctca 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
