Query= MSMg01no351_m05.b1 MSMg01no351_m05.b1 CHROMAT_FILE:
MSMg01no351_m05.b1 PHD_FILE: MSMg01no351_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:05 2005
(431 letters)
>mm_chr1_153603899_153604730
Length = 832
Score = 799 bits (413), Expect = 0.0
Identities = 422/425 (99%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 5 gaattctagactcttcccttttcctttataagtttaatgtattattttgtgacattttaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagactcttgccttttcctttataagtttaatgtattattttgtgacattttaa 264
Query: 65 tgatgttcccactttgttggcatttaactcatgccatctctaaaactgttactccatcgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 tgatgttcccactttgttggcatttaactcatgccatctctaaaactgttattccatcgc 324
Query: 125 gaggtggatgctatctccactgtgcaaatgaggacattgagattcagggttaacttgctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaggtggatgctatctccactgtgcaaatgaggacattgagattcagggttaacttgctc 384
Query: 185 agagtctcaaagcgggtcaggtttgtggtttttggttacatttatatttttaacctatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agagtctcaaagcgggtcaggtttgtggtttttggttacatttatatttttaacctatgt 444
Query: 245 ctgatctcacagttcacagtctgtacagtgctgtacttccttaagatttgggggagggga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgatctcacagttcacagtctgtacagtgctgtacttccttaagatttgggggagggga 504
Query: 305 agtatttctattatggctgcaaatattttctttgacattcttattaaaatttctatatga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtatttctattatggctgcaaatattttctttgacattcttattaaaatttctatatga 564
Query: 365 gtcattgacttgccagccccaggttcagtctcaaaaaaaccaagctgtaccccctgcgcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtcattgacttgccagccccaggttcagtctcaaaaaaaccaagctgtaccccctgcgcc 624
Query: 425 -gccc 428
||||
Sbjct: 625 cgccc 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space: 347306
Effective search space used: 347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_m05.g1 MSMg01no351_m05.g1 CHROMAT_FILE:
MSMg01no351_m05.g1 PHD_FILE: MSMg01no351_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:05 2005
(347 letters)
>mm_chr1_153794278_153795025
Length = 748
Score = 594 bits (307), Expect = e-174
Identities = 333/343 (97%), Gaps = 5/343 (1%)
Strand = Plus / Minus
Query: 1 caagaggcaaccaccactgaagggcatagggtcctttaaagggccaggcatacaaagtaa 60
||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||
Sbjct: 516 caagaggcaaccaccactgaaaggcatctggtcctttaaagggccaggcacacaaagtaa 457
Query: 61 accacactacacaagtgttacacaaaaatgctacctcaaaggaagaagaaggtcttgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 accacactacacaagtgttacacaaaaatgctacctcaaaggaagaagaaggtcttgact 397
Query: 121 gtcctgaaatatctctctgagtgtggcctttaagt-ggcagaggagatgatgaacaggtt 179
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 396 gtcctgatatatctctctgagtgtggcctttaagtgggcagaggagatgatgaacaggtt 337
Query: 180 gcaggagaaaataggatgtgtggaaggagaggagaaagtccacctcagcagagggatgag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gcaggagaaaataggatgtgtggaaggagaggagaaagtccacctcagcagagggatgag 277
Query: 240 agacacagatgaataaaacaaagtgatggttttgcttaggatgttggcagcacttttgtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 agacacagatgaataaaacaaagtgatggttttgcttaggatgttggcagcacttttgtg 217
Query: 300 agattggcttgtttgggtttttttttggntttttttttttttt 342
|||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 216 agattggcttgtttgg-ttttttttt---tttttttttttttt 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 748
Length adjustment: 9
Effective length of query: 338
Effective length of database: 739
Effective search space: 249782
Effective search space used: 249782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
