Query= MSMg01no351_p14.b1 MSMg01no351_p14.b1 CHROMAT_FILE:
MSMg01no351_p14.b1 PHD_FILE: MSMg01no351_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:21 2005
(598 letters)
>mm_chr1_99447860_99448854
Length = 995
Score = 1102 bits (570), Expect = 0.0
Identities = 587/594 (98%), Gaps = 3/594 (0%)
Strand = Plus / Plus
Query: 5 gaattctataaactgtccggccagaggtaagtccatttcttagagtgaagttgatcctat 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctataaactgtgaggccagaggtaagtccatttcttagagtgaagttgatcctat 264
Query: 65 gtaagaaaaccaacagaggatgtttctgagcatgtcctctcattggggtgtcaaaatgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaagaaaaccaacagaggatgtttctgagcatgtcctctcattggggtgtcaaaatgaa 324
Query: 125 gccattacaaataaggaccttggcaaaactgcctgggctatatggggagcaaacaaaagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gccattacaaataaggaccttggcaaaactgcctgggctatatggggagcaaacaaaagt 384
Query: 185 ctatactgcaaactctagtgtaccatcaacagcatatacaggcagaattcccgagagtta 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctatattgcaaactctagtgtaccatcaacagcatatacaggcagaattcccgagagtta 444
Query: 245 cacttaccattcatcactgttcctaattactgtcagtgagcatgcccaaacctctccagg 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacttaccattcatcactgttcctaattactgtcagtgagcatgcccaaacctctccagg 504
Query: 305 caaaggcaatgtcccatgaaacatgttgtctcccttcataattcactttctgtccttcca 364
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 caaaggcaatgtcccatgaaacatgt---ctcccttcataattcactttctgtccttcca 561
Query: 365 ataacataatctttagctgttcttttatggtgttctttcatagaaacagtgattgaatgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ataacataatctttagctgttcttttatggtgttctttcatagaaacagtgattgaatgg 621
Query: 425 ccccatgacctttgtttgtgttcagtgttataagaattccagaatcaaacactcataact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ccccatgacctttgtttgtgttcagtgttataagaattccagaatcaaacactcataact 681
Query: 485 ttaaacagagtactttactttgcaagagtgcttagaattaggtctttctaaactatttca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ttaaacagagtactttactttgcaagagtgcttagaattaggtctttctaaactatttca 741
Query: 545 tagttggctattgggaaaggcagtccatatgatgtcctgacattggtctattca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tagttggctattgggaaaggcagtccatatgatgtcctgacattggtctattca 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 995
Length adjustment: 10
Effective length of query: 588
Effective length of database: 985
Effective search space: 579180
Effective search space used: 579180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_p14.g1 MSMg01no351_p14.g1 CHROMAT_FILE:
MSMg01no351_p14.g1 PHD_FILE: MSMg01no351_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:21 2005
(383 letters)
>mm_chr1_99610202_99610984
Length = 783
Score = 725 bits (375), Expect = 0.0
Identities = 381/383 (99%)
Strand = Plus / Minus
Query: 1 aattctagagttcctcccaaattttgaataaatccgacagcgtgtaatctcataatgagc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 583 aattctagagttcctcccaaattttgaataaatctgacagcgtgtaatctcataatgagc 524
Query: 61 atatgtatgttgaaaagtgtctgttttgcagtctgagtttagataatttttcttttttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atatgtatgttgaaaagtgtctgttttgcagtctgagtttagataatttttcttttttac 464
Query: 121 ctgtaatactctgtttctacctgaatttgagtgttggaggtattttccacagaagactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctgtaatactctgtttctacctgaatttgagtgttggaggtattttccacagaagactta 404
Query: 181 gtttgaattctgggaaactttgtgattttaaaagaaatgaaaacaatttttaaagccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtttgaattctgggaaactttgtgattttaaaagaaatgaaaacaatttttaaagccatt 344
Query: 241 ctgttaaataaagcttaaatgaatgggtcattttattcttaataaatgaaaaactaatat 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cagttaaataaagcttaaatgaatgggtcattttattcttaataaatgaaaaactaatat 284
Query: 301 ttttgtcttagaaacataatttgtatgtatatgtgcttttgtgtcactgattctgttagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttttgtcttagaaacataatttgtatgtatatgtgcttttgtgtcactgattctgttagc 224
Query: 361 acattgctgcatgactcaccatg 383
|||||||||||||||||||||||
Sbjct: 223 acattgctgcatgactcaccatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
