NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGTACTCTCACCTGTGAAGAATTCACTCAGTGGGGTCCTGGAACC
AAGATGTCTGCTACCGATGCTCAGGCAAAGTGCTCCTTCTCCGCTGGGAC
CCCTTTCCTCTGGCCTGGAAGGTGGCAGGATGTGTGGGGCCTGTGCAGAA
TGCACTCGGTGGGGTCCTGGAACCAGGATGTCTGCTGCTGATGCTCAGGC
AAAGCACTCCCTCTCCGCTCGGACCCCTTTCCTCTGTCTGGGAAGGTGGC
TGGATGTCTGGGGCCTGTGCAGAATTCTCACTCTACTTTCAAAGTGATAA
TTAGTCTGTGAACCCATTAATTCAAAAGTAACTGCCAATAGCAGTGCCAT
ATTGAAAATACTAAATATAGCATCTATAAAACTTCATAAAAATCTTATAT
ATTTCTCAAATTTATTTAGTTAAATGGACAAAGCAGTTTAATGAACAGTT
TTGAAAATAAATGCGTTATAAAATTCACTCTTAGTTACCCACTAAATTCT
TACTGCTTCTGATTTGCCAATAGAATTATTTTTACAAACTGAAGTGATTT
TTTTTACCACTCAAAGTTTTAACAATAGCTATGCGAGAGTTGGAGTTAGT
GAAATATAACATAAGCATATGCACATGTTAATTTATGTGCATGTTTTATA
AAATCTTTCCTGGAGTTTTCATTTGAATAGATATGTTATGAGATTCTGAG
ATTCCCCTTG

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCAT
GAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAATGAGATGA
TCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATG
GATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTG
GTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAA
TTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAG
TTCTCTATCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCAGAGAAATAGT
GGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAA
ATAGTTTGTGCAGAATTGGAATTAGATCTTCTTTGAAGGTCTGGTAGAAC
TCTGCAGTAAACCCATCTGGTCCTGGGCTTTTTTTGTTTGGGAGACTATT
AATAAATGCCTCCATTTCTTTAAGTGATATGGGACTGTTTATATGGGCCA
TTTGTTCCTGACTCACTTTGGGAACTGGATTTTGCCAGAAATTTGTCATT
TCTCCCCATTTTCCTCTTTTGTGAGCATACCCTTTGCAAAAAATTACAGA
TTTTTCCCTTTTTTTCCACCCTCGCTTTTTTCTCTCTTTTTTCCCTCTTT
CTTCCCTATATTTCCCCTCTTCCTTTTTCTTTTACAC

Query= MSMg01no354_i21.b1 MSMg01no354_i21.b1 CHROMAT_FILE:
MSMg01no354_i21.b1 PHD_FILE: MSMg01no354_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:44 2005
         (521 letters)



>mm_chr1_143126441_143127362
          Length = 922

 Score =  758 bits (392), Expect = 0.0
 Identities = 437/454 (96%), Gaps = 5/454 (1%)
 Strand = Plus / Minus

                                                                       
Query: 69  ccgatgctcaggcaaagtgctccttctccgctgggacccctttcctctggcctggaaggt 128
           ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 922 ccgatgctcaggcaaagtgctccctctccgctcggacccctttcctctggcctggaaggt 863

                                                                       
Query: 129 ggcaggatgtgtggggcctgtgcagaatgcactcggtggggtcctggaaccaggatgtct 188
           |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 862 ggcaggatgtctggggcctgtgcagaatgcactcagtggggtcctggaaccaggatgtct 803

                                                                       
Query: 189 gctgctgatgctcaggcaaagcactccctctccgctcggacccctttcctctgtctggga 248
           |||| ||||||||||||||||  ||||||||| ||||||||||||||||    |||||||
Sbjct: 802 gctgatgatgctcaggcaaagtgctccctctctgctcggacccctttcc----tctggga 747

                                                                       
Query: 249 aggtggctggatgtctggggcctgtgcagaattctcactctactttcaaagtgataatta 308
           |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 746 aggtggctggatgtctggggactgtgcagaatcctcactctactttcaaagtgataatta 687

                                                                       
Query: 309 gtctgtgaacccattaattcaaaagtaactgccaatagcagtgccatattgaaaatacta 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gtctgtgaacccattaattcaaaagtaactgccaatagcagtgccatattgaaaatacta 627

                                                                       
Query: 369 aatatagcatctataaaacttcataaaaatcttatatatttctcaaa-tttatttagtta 427
           |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 626 aatataacatctataaaacttcataaaaatcttatatatttctcaaagtttatttagtta 567

                                                                       
Query: 428 aatggacaaagcagtttaatgaacagttttgaaaataaatgcgttataaaattcactctt 487
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 566 aatggacaaagcagtttaatgaacagttttgaaaataaatgtgttataaaattcactctt 507

                                             
Query: 488 agttacccactaaattcttactgcttctgatttg 521
           ||||||||||||||||||||||||||||||||||
Sbjct: 506 agttacccactaaattcttactgcttctgatttg 473


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 922
Length adjustment: 10
Effective length of query: 511
Effective length of database: 912
Effective search space:   466032
Effective search space used:   466032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)