Query= MSMg01no355_f03.b1 MSMg01no355_f03.b1 CHROMAT_FILE:
MSMg01no355_f03.b1 PHD_FILE: MSMg01no355_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:44 2005
(571 letters)
>mm_chr1_22906087_22907057
Length = 971
Score = 1081 bits (559), Expect = 0.0
Identities = 565/567 (99%)
Strand = Plus / Minus
Query: 5 gaattccagatattaacagtcactggaatggcacaattacataagaaagctgtcttattc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 937 gaattccagatattaagagtcactggaatggcacaattacataagaaagctgtcttagtc 878
Query: 65 tgtgctactgtaacaagatacctgagactggagagtttatgaagaacagatagtaatttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 tgtgctactgtaacaagatacctgagactggagagtttatgaagaacagatagtaatttt 818
Query: 125 tctcaaagctctggagagtgagaagcctgaggtcaaggcattggcatcctagtacattat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tctcaaagctctggagagtgagaagcctgaggtcaaggcattggcatcctagtacattat 758
Query: 185 aacatgggtaaaagtatcacatgggtcagacagagagaaaaatgataaatctatagtaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aacatgggtaaaagtatcacatgggtcagacagagagaaaaatgataaatctatagtaat 698
Query: 245 caatcctggctcacaatcatgtcttttttatccatccctgaaagtagtactgagtcattg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 caatcctggctcacaatcatgtcttttttatccatccctgaaagtagtactgagtcattg 638
Query: 305 aagtgcctcccacccagtcacctttccaaagatgtcagcctcagggatgcagttccctgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aagtgcctcccacccagtcacctttccaaagatgtcagcctcagggatgcagttccctgc 578
Query: 365 acatatgctttggaagacacattctagccacatcagagaggttcctttctgctcaatcac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 acatatgctttggaagacacattctagccacatcagagaggttcctttctgctcaatcac 518
Query: 425 tggcattgactcaattcatttatgtgcactacaaagggcaagagtcctcaaaggaaactg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tggcattgactcaattcatttatgtgcactacaaagggcaagagtcctcaaaggaaactg 458
Query: 485 tcacacaaaggtctcaaccaggagtcagaatcaggttacaacttgagttcaaagtcagga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcacacaaaggtctcaaccaggagtcagaatcaggttacaacttgagttcaaagtcagga 398
Query: 545 caggaaaattagggagaagaggagaat 571
|||||||||||||||||||||||||||
Sbjct: 397 caggaaaattagggagaagaggagaat 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_f03.g1 MSMg01no355_f03.g1 CHROMAT_FILE:
MSMg01no355_f03.g1 PHD_FILE: MSMg01no355_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:44 2005
(442 letters)
>mm_chr1_22740918_22741759
Length = 842
Score = 803 bits (415), Expect = 0.0
Identities = 436/443 (98%), Gaps = 2/443 (0%)
Strand = Plus / Plus
Query: 1 agagtgaccttaattcaatgggaacgctgtaaaatgtaatatgtaatgcagcttatctga 60
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtgaccttaattcaatggaaatgctgtaaaatgtaatatgtaatgcagcttatctga 260
Query: 61 cataaagatctacacaaaactacatggaaaaagataaaagttcagtcattttaaggaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cataaagatctacacaaaactacatggaaaaagataaaagttcagtcattttaaggaagg 320
Query: 121 gtacaattgataaaactcacttcaaatacactttacaaaagagcttcagaaatgatctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacaattgataaaactcacttcaaatacactttacaaaagagcttcagaaatgatctca 380
Query: 181 tttccattcacaaactctgagaggaaaagcttcaaaaatactgtcataaaactcatttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttccattcacaaactctgagaggaaaagcttcaaaaatactgtcataaaactcatttta 440
Query: 241 tattaacagttgcataatgatgtcgattccactgtgaacaaatgaatgtgacttttaccc 300
|||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 tattaagaattgcataatgatgtcaattccactgtgaacaaatgaatgtgacttttaccc 500
Query: 301 ataagagatgtagctgaggaaattctccaccaggaggagaatgagaatactgagcaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataagagatgtagctgaggaaattctccaccaggaggagaatgagaatactgagcaagga 560
Query: 361 agagccagatgtactaaccacaaaccatcagtgtgcattctgggaactctcaaaagccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agagccagatgtactaaccacaaaccatcagtgtgcattctgggaactctcaaaagccac 620
Query: 421 atctagggg-atttttattttaa 442
||| ||||| |||||||||||||
Sbjct: 621 atc-agggggatttttattttaa 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
