Query= MSMg01no355_p10.b1 MSMg01no355_p10.b1 CHROMAT_FILE:
MSMg01no355_p10.b1 PHD_FILE: MSMg01no355_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:33 2005
(423 letters)
>mm_chr1_192449321_192450143
Length = 823
Score = 716 bits (370), Expect = 0.0
Identities = 385/392 (98%), Gaps = 4/392 (1%)
Strand = Plus / Minus
Query: 32 aatgcccctttccagtaatttaccttttattctgtcctgatcagactcagccagttcatg 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 aatgcccctttccagtaatttaccttttattctgtcctgatcagactcagccagttcatg 764
Query: 92 ttctttaccaagttttttcaatgactctgttgttgattaacgcttctgagaggctattgc 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ttctttaccaagttttttcaatgactctgttgttgattaacgcttctgagaggctattgc 704
Query: 152 atagaccagggagacagccaagtggtggtgtgcttgtctagcactcgtgaagttctgggt 211
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 atagagcagggaga----caagtggtggtgtgcttgtctagcactcgtgaagttctgggt 648
Query: 212 tcaagtcccaccattgcaagagaatgagttctatgagtttctgaattcattaggccatcc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tcaagtcccaccattgcaagagaatgagttctatgagtttctgaattcattaggccatcc 588
Query: 272 tgctttctttaatttgtctgtttttcttttttagattcttaattagttgcattaatgata 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgctttctttaatttgtctgtttttcttttttagattcttaattagttgcattaatgata 528
Query: 332 ttttttaaagaaatgtatttcaggttatatattttcttaagatttatttccgtggtagag 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttttttaaagaaatgtatttcaggttatatattttcttaagatttatttccgtggtagag 468
Query: 392 catactcatactcctaggactgggacaatgaa 423
||||||||||||||||||||||| || |||||
Sbjct: 467 catactcatactcctaggactggaacgatgaa 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_p10.g1 MSMg01no355_p10.g1 CHROMAT_FILE:
MSMg01no355_p10.g1 PHD_FILE: MSMg01no355_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:33 2005
(237 letters)
>mm_chr1_192261415_192262051
Length = 637
Score = 458 bits (237), Expect = e-133
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 1 ttctcagtgtcctctttgaaagagaacaggcaaaagggaccctccaaagagatggagttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcagtgtcctctttgaaagagaacaggcaaaagggaccctccaaagagatggagttg 260
Query: 61 ggggtgctgctgggagccaggtctcggcagcctgaggactctagatttctggctcagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggtgctgctgggagccaggtctcggcagcctgaggactctagatttctggctcagtga 320
Query: 121 taactcagagtggttgttccctcttcccttctcaggaggagggacttgatagtaactgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taactcagagtggttgttccctcttcccttctcaggaggagggacttgatagtaactgct 380
Query: 181 ctgtttcttaccagccactgactgctggggcctctacgctaagaatatatcctaaaa 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtttcttaccagccactgactgctggggcctctacgctaagaatatatcctaaaa 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
