XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTCACTAATCTCACTGCATGTGAGGCTCTTGATTCTTGCTAAGATTGCCA
GCCTTCCTGTTGAGGTTGCAGACACAATGACCTGTGTTGGGCAATTAGTT
ACAAGGAAGCTGGCATCGTTCCCAACAGTTTAAGCGTACAATCTCATTAA
GACTCGCAAAGCCTTCGTGAACTGGATCCATGACATGCATGAGAAAATGG
AGATTAAGAAAGATCTTCCCAAGCTCTCACAACCACCAAACCATCAGACA
CAGGACCAACCCAAGCTTTCAGTCTCCAGAGCCCCAGTCACATGTCAGGC
TTCCTCTACTGCTGGGAGAGGGTCCTGGATGAGGTGGCACTTCTGTTTTA
TAACCTCAAACTCTATATCTAGGCTACAGTGTAACTGAGATGTTTTACGA
CTGGCTTCTTACTCCTGGGCTATTACTTAACTCTGTAAATATGAAATATT
TAAACACAAATTATATTGTGCATATAAATCTTGCGTATATATCCGATATA
TAAGTGACCGATTTCCTAAAATAGAAATGGAATTATTAACGTTACAAATA
ATCCTAGAAATGCTCCCCAAAGGGTTGCGTTTGCACCCTTTTTCTGAAGT
ATCTCATTGGAATATTCCCTGCCTTTTTTACATTTATCTTCCCTCATGGA
AACTATGCTTCCTCTTATGACGCATACTCTCCCATATGTTTGGTTCTCTG
TT

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAATAACTCACTTAAAGAAATACAGGAGAA
CACTGCTAAAGAGTTACAAGTCCTTAAAGAAAAACAGGAAAACACTGCTA
AAGAGTTACAAGTCCTTAAAGAAAAACAGGAAAACACAACCAAACAGGTA
GAAGTCCTTATAGAAAAACAGGAAAACACATCCAAACAGGTGATGGAAAT
GAACAAAACCATACTAGACCTAAAAAGGGAAGTAGACACAATAAAGAAAA
CCCAAAGTGAGGCGAGCTGGAGATAGAAACCCTAGGAAAGAAATCTGGAA
CCATAGATGCCAGCATCAGCAACAGAATACAAGAGATGGAAGAGAGAATC
TCAGGTGCAGAAGACTCCATAGAGAACATCGGCACAACAATCAAAGAAAA
TGGAAAATGCAAAAAGATCCTAACTCAAAACATCCAGGAAATCCAGGACA
CCATGAGAAGACCATACCTACGGATAATAGGAGTGGATGAGAATGAAGAT
TTTTATCTTTTTGGACTAGCCCATATCTTCTATTAAATTTTGTGAAAAAT
CTTCCTAACAACTAAAAAAAGATATGCCCCTTGTATTTTATCACATTCTT
TCTATTAACCCCCTTACATACTGGCACCCTTTAAAATCAATCCCTCTCCG
ACCCTATTTTTATCCCCTCATTACTTTAACGGGATTTACTCTATCGATAG
GTATTCTATACACATTTACCCG

Query= MSMg01no356_g04.b1 MSMg01no356_g04.b1 CHROMAT_FILE:
MSMg01no356_g04.b1 PHD_FILE: MSMg01no356_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:05 2005
         (495 letters)



>mm_chr1_178114000_178114894
          Length = 895

 Score =  884 bits (457), Expect = 0.0
 Identities = 478/485 (98%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcctcactaatctcactgcatgtgaggctcttgattcttgctaagattgccagccttcct 68
           |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 209 tcctcactaaactcactgcatgtgaggctcttgattcttgctaagatttccagccttcct 268

                                                                       
Query: 69  gttgaggttgcagacacaatgacctgtgttgggcaattagttacaaggaagctggcatcg 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gttgaggttgcagacacaatgacctgtgttgggcaattagttacaaggaagctggcatcg 328

                                                                       
Query: 129 ttcccaacagtttaagcgtacaatctcattaagactcgcaaagccttcgtgaactggatc 188
           ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 329 ttcccaacagtttaagcgtacgatctcattaagactcacaaagccttcgtgaactggatc 388

                                                                       
Query: 189 catgacatgcatgagaaaatggagattaagaaagatcttcccaagctctcacaaccacca 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 catgacatgcatgagaaaatggagattaagaaagatcttcccaagctctcacaaccacca 448

                                                                       
Query: 249 aaccatcagacacaggaccaacccaagctttcagtctccagagccccagtcacatgtcag 308
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaccatcagacacaggaccaaaccaagctttcagtctccagagccccagtcacatgtcag 508

                                                                       
Query: 309 gcttcctctactgctgggagagggtcctggatgaggtggcacttctgttttataacctca 368
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gcttcctctacttctgggagagggtcctggatgaggtggcacttctgttttataacctca 568

                                                                       
Query: 369 aactctatatctaggctacagtgtaactgagatgttttacgactggcttcttactcctgg 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aactctatatctaggctacagtgtaactgagatgttttacgactggcttcttactcctgg 628

                                                                       
Query: 429 gctattacttaactctgtaaatatgaaatatttaaacacaaattatattgtgcatataaa 488
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 629 gctattacttaactctgtaaatatgaaatatttaaacacaaattatattgtgtatataaa 688

                
Query: 489 tcttg 493
           |||||
Sbjct: 689 tcttg 693


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space:   429225
Effective search space used:   429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)