ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCGTGGGATACCACAATACGAAGGTGAAGATGATGTAATTAAACAACTTT
GTTTAATTAAAACAAAAAAGTATTAAGATAATTTTCAAAAATTTCAATAC
ACTTTCCTATCAACTACTAGTATAAAAGTATTTCAAGCACGTCAATGGAG
CTGAGCACTTCTGCTTGCATGAGCAAGTGTTATTAGTGAGATATACATTA
AGAATCTTGCCACATGAGGGCTGGAGAGATGTCTTAGCAGATAAGAGCAC
TGGCTGCTCTTCCAAAGGACCTGAGAAATTCAGTTCCTAGCACCCACATG
GCAGCTAGGAACCATCTGTAATTCCAGTTCCAGAGTACTGGATGCCCTCA
TCTGGCATCTGTAGGCACTACTTCTATTACTACTACTACTACTACTACTA
CTACTACTACTACTACTACTACTGCTACTACTACTACTACTCACACACAC
ACACACACACACACACACACACACACACACACACCAAATACACACACACA
GTTGACAGACATACATGCAGGTAAATACCCTCTTGCAATTAATACCTGCC
GGGAACGGATAGTCTGTTTTCTCCCCTGAAATAACACTGTGTATAGCATA
TATCAGCCAGATTTCTTGGTAGGTCCCATGTTCTTAATTAGCCTTCTTGA
CCTCCACCTTATTGTGCGTGGGTGTGTTGCGCAAG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCCTGGTGGCCACCCTTGTTATTTTAGAGGGA
ATTGGTATTTCCAAGCATCGCCATATGATCCAACTAAAATCCCCACATCA
CAAAGAGAAGTGTCTTCTGAAGGCCAGAATTTGGGATTTGCCAATGATGC
TGGGATTGGAAGACATTGCTGCATCTGCAGACTGAGGTCACATGGTTAGG
TTCCTTTATGCACCACTCTGAAGAATCAGATTCCCTTGCCTCACCAAGAA
AGAGTGTCTTGTGCCAGCATTTACAAAGCAGTCTCAGTGCCACTCTGCTC
AGATACACCCAGACCAGCACTGAATTTGCCAGCACCCTGTTAGCTGCCCG
TGAGCTTGGAGAATTTGCTCTTGTAGAGACTGCTTTTGCAGGCTAGTTAT
TCAGTTCTTTCTGTTAAAGGTCAGACTTTTGTTAGAGTGTGATTAAAGTT
TCCATATTTTACATAAATTGTCCCCCTTTTTTCCCTCCCTAATATGGGTT
CCTGTCAGAAGACTTGCGAAAAGTTTTATTTCCTTTTTTCCCTCTAAAAA
TTTAATGACGCTTGCAATTCCTTTTACCTTAATAATTTGCGAAATGCTAA
GGCTGGACTCCCCATATGTGATACCCGGTGACTCTGATTTGGCCCATGGC
GCCGGCTTAATAACAGTGTGCAACTTCCTCGCTTCTTTCCTTAT

Query= MSMg01no356_m03.g1 MSMg01no356_m03.g1 CHROMAT_FILE:
MSMg01no356_m03.g1 PHD_FILE: MSMg01no356_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:35 2005
         (525 letters)



>mm_chr1_84022982_84023906
          Length = 925

 Score = 1000 bits (517), Expect = 0.0
 Identities = 523/525 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctggtggccacccttgttattttagagggaattggtatttccaagcatcgccatatgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cctggtggccacccttgttattttagagggaattggtatttccaagcatcgccatatgat 666

                                                                       
Query: 61  ccaactaaaatccccacatcacaaagagaagtgtcttctgaaggccagaatttgggattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ccaactaaaatccccacatcacaaagagaagtgtcttctgaaggccagaatttgggattt 606

                                                                       
Query: 121 gccaatgatgctgggattggaagacattgctgcatctgcagactgaggtcacatggttag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gccaatgatgctgggattggaagacattgctgcatctgcagactgaggtcacatggttag 546

                                                                       
Query: 181 gttcctttatgcaccactctgaagaatcagattcccttgcctcaccaagaaagagtgtct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gttcctttatgcaccactctgaagaatcagattcccttgcctcaccaagaaagagtgtct 486

                                                                       
Query: 241 tgtgccagcatttacaaagcagtctcagtgccactctgctcagatacacccagaccagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgtgccagcatttacaaagcagtctcagtgccactctgctcagatacacccagaccagca 426

                                                                       
Query: 301 ctgaatttgccagcaccctgttagctgcccgtgagcttggagaatttgctcttgtagaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctgaatttgccagcaccctgttagctgcccgtgagcttggagaatttgctcttgtagaga 366

                                                                       
Query: 361 ctgcttttgcaggctagttattcagttctttctgttaaaggtcagacttttgttagagtg 420
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctgcttttgcaggctggttattcagttctttctgttaaaggtcagacttttgttagagtg 306

                                                                       
Query: 421 tgattaaagtttccatattttacataaattgtcccccttttttccctccctaatatgggt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgattaaagtttccatattttacataaattgtcccccttttttccctccctaatatgggt 246

                                                        
Query: 481 tcctgtcagaagacttgcgaaaagttttatttccttttttccctc 525
           ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 245 tcctgtcagaagacttgggaaaagttttatttccttttttccctc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space:   471225
Effective search space used:   471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)