Query= MSMg01no358_h08.b1 MSMg01no358_h08.b1 CHROMAT_FILE:
MSMg01no358_h08.b1 PHD_FILE: MSMg01no358_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:43 2005
(544 letters)
>mm_chr1_91755322_91756264
Length = 943
Score = 1013 bits (524), Expect = 0.0
Identities = 536/540 (99%), Gaps = 1/540 (0%)
Strand = Plus / Minus
Query: 5 gaattcattctcagcagaatccaaaacatatcactggtgcacctatctgtgaagtggcgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaattcattctcagcagaatccaaaacatatcactggtgcacctatctgtgaagtggcgc 684
Query: 65 cctcgggtggctgggatgcacaatgcggctctgagaaggacattgggagaactctaatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cctcgggtggctgggatgcacaatgcggctctgagaaggacattgggagaactctaatga 624
Query: 125 aagaagccactgggtttttacaaggaggctgtgactataaaaggccatctggaagtcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aagaagccactgggtttttacaaggaggctgtgactataaaaggccatctggaagtcaga 564
Query: 185 agtcctgggctgtgttcccaggaagccacctccatcatcctttgccttttcagaagtggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agtcctgggctgtgttcccaggaagccacctccatcatcctttgccttttcagaagtggc 504
Query: 245 tctgacttctctagaaatgaatatgctttctggaacacatgtgtgcttaaataaggggcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tctgacttctctagaaatgaatatgctttctggaacacatgtgtgcttaaataaggggcc 444
Query: 305 ctggagaccaggccaggcccaggaagtttatgtacacagctctagggctaacttacagag 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctggagaccaggccaggctcaggaagtttatgtacacagctctagggctaacttacagag 384
Query: 365 ctgtgtttggataatggggtcagggacggcacctagctggtagctatagaaggtgggcaa 424
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 383 ctgtgtttggataatggggtcagggacagcacctagctggtagctatagaaggtgggcaa 324
Query: 425 catggcagctgcattgacgcacaagatctcaggatggattcggacattgttcatgtccgc 484
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catggcagctgcattgatgcacaagatctcaggatggattcggacattgttcatgtccgc 264
Query: 485 aagggacaaacatgacatactgaagagcagacaacaggtctgggggtgggggggtggggt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 263 aagggacaaacatgacatactgaagagcagacaacaggtctgggggtgggggg-tggggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 943
Length adjustment: 10
Effective length of query: 534
Effective length of database: 933
Effective search space: 498222
Effective search space used: 498222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_h08.g1 MSMg01no358_h08.g1 CHROMAT_FILE:
MSMg01no358_h08.g1 PHD_FILE: MSMg01no358_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:44 2005
(496 letters)
>mm_chr1_91567408_91568303
Length = 896
Score = 959 bits (496), Expect = 0.0
Identities = 496/496 (100%)
Strand = Plus / Plus
Query: 1 tctttggaatgatgagtcagagcctatagactgatgggggtggcggtcctcaatcctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttggaatgatgagtcagagcctatagactgatgggggtggcggtcctcaatcctgtt 260
Query: 61 ggcaggagctctgcacagaggggcaagacccgtctggcagccacaaccctcgcccaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcaggagctctgcacagaggggcaagacccgtctggcagccacaaccctcgcccaaatg 320
Query: 121 ctaactttactttttttgctttgcagtctaggaaagggagcgacccagacaaagagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaactttactttttttgctttgcagtctaggaaagggagcgacccagacaaagagaaga 380
Query: 181 aaggcctggagagccgtgcggacagcatcgggagcgggcgagccatcccaattaaacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggcctggagagccgtgcggacagcatcgggagcgggcgagccatcccaattaaacagg 440
Query: 241 tacacttgtccccttccccgcctcgctggagacacacctcggtgcagcctgggatgctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacacttgtccccttccccgcctcgctggagacacacctcggtgcagcctgggatgctgc 500
Query: 301 tggctggagcaccagggtttgtttgatgtgctctgttgatgaatgtagaagtcactcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggctggagcaccagggtttgtttgatgtgctctgttgatgaatgtagaagtcactcact 560
Query: 361 tgacatcaattagaaggggttcctgtgagtattaaaatgggatcattagaataagaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgacatcaattagaaggggttcctgtgagtattaaaatgggatcattagaataagaagag 620
Query: 421 ggaaatgcgacagcagctctaatgaagtgcggtctgcccgcctgcatatggagtgtgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaaatgcgacagcagctctaatgaagtgcggtctgcccgcctgcatatggagtgtgttt 680
Query: 481 ccatgctgcactggct 496
||||||||||||||||
Sbjct: 681 ccatgctgcactggct 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
