Query= MSMg01no360_h06.b1 MSMg01no360_h06.b1 CHROMAT_FILE:
MSMg01no360_h06.b1 PHD_FILE: MSMg01no360_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:12 2005
(458 letters)
>mm_chr1_146362952_146363809
Length = 858
Score = 820 bits (424), Expect = 0.0
Identities = 445/452 (98%)
Strand = Plus / Plus
Query: 7 ggaattctttaagtatctaccatttaacactcatttctgataatcctccgttaaaatgca 66
||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 207 ggaattctttaagtagctaccacttaacactcatttctgatactcctccgttaaaatgca 266
Query: 67 atagaaaaatctgacaaaaagaggcacacagtctgtgtgactctttattcatataataat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atagaaaaatctgacaaaaagaggcacacagtctgtgtgactctttattcatataataat 326
Query: 127 tgattaccgttctgacaacaccccacctttttacatggctgtaaagagaattcattttaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgattaccgttctgacaacaccccacctttttacatggctgtaaagagaattcattttaa 386
Query: 187 attaattgacaacactatgaaataaattgctttactatatgtctagaaagtaaagcagac 246
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 387 attaattgacaacactatgaaataaattgctttactatgtgtctagaaagtaaagcagac 446
Query: 247 ccagaccagatataattatattcaaattgctgtatagggcttgtgtggatgaagtctaga 306
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 447 ccagaccagatataattatattcaaattgctgtatagggcttgtgtggatgaaggctagt 506
Query: 307 gccagaaccatttgcatgggaagtaaatgttagaagacaaatgatgcaggaatcacactt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gccagaaccatttgcatgggaagtaaatgttagaagacaaatgatgcaggaatcacactt 566
Query: 367 tctttagttttcaaaaaaattctcccccacttttctctatcttttggtattgctctctct 426
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tctttagttttcaagaaaattctcccccacttttctctatcttttggtattgctctctct 626
Query: 427 ttttttagagtgaatgtctggttttcctgtag 458
||||||||||||||||||||||||||||||||
Sbjct: 627 ttttttagagtgaatgtctggttttcctgtag 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_h06.g1 MSMg01no360_h06.g1 CHROMAT_FILE:
MSMg01no360_h06.g1 PHD_FILE: MSMg01no360_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:12 2005
(443 letters)
>mm_chr1_146496869_146497711
Length = 843
Score = 826 bits (427), Expect = 0.0
Identities = 439/443 (99%), Gaps = 1/443 (0%)
Strand = Plus / Minus
Query: 1 caaaattcacagcatccagtgcatgatttcacaagacatctcaagcttaagcataaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 caaaattcacagcatccagtgcatgatttcacaagacatctcaagcttaagcataaatca 417
Query: 61 ccagtagttgttttcatacttaattctcatactttgtaatgctcactctcagcttctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ccagtagttgttttcatacttaattctcatactttgtaatgctcactctcagcttctgct 357
Query: 121 taatttcttcttttatcactattcatagtcttcttgctcatctacccttatgacagaaag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 356 taatttcttcttttatcactattcatagtcttcttgctcatctacgcttatgagagaaag 297
Query: 181 atccctatgtttggtaggggtgatagcatttggcaataaaatagtcttaaaattgcatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atccctatgtttggtaggggtgatagcatttggcaataaaatagtcttaaaattgcatga 237
Query: 241 gctatggttttgccagatcaccattcttttactttttttttataggttgagataataatc 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 236 gctatggttttgccagatcaccattcttttac-ttttttttataggttgagataataatc 178
Query: 301 acaacatgttcccttatctttcctccttccaaaccctcccttatatattttctcactttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 acaacatgttcccttatctttcctccttccaaaccctcccttatatattttctcactttc 118
Query: 361 ctgtaaacacatgacctcctttttcattaattgttattgtatgccattttatggttggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ctgtaaacacatgacctcctttttcattaattgttattgtatgccattttatggttggac 58
Query: 421 tgaaaaatgcatactatcttaga 443
| |||||||||||||||||||||
Sbjct: 57 taaaaaatgcatactatcttaga 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
