This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
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BAC Information
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Search Result
BAC
Clone Name
MSMg01-361G12
Chromosome
1 (Build37)
Map Location
68,043,324 - 68,230,218
singlet/doublet
doublet
Overlap gene
Erbb4
Upstream gene
Lancl1
,
Cps1
,
Kif22-ps
Downstream gene
LOC667842
Link
Open Mouse BAC browser
Click to get alignment info.
name
Lancl1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:14768
MGI:1336997
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Cps1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:227231
MGI:891996
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Kif22-ps
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:110032
MGI:109206
definition
gene_synonym
: AL033313; Kif22b; MGC6456
note
: kinesin family member 22, pseudogene
pseudo
: _no_value
name
Erbb4
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:13869
MGI:104771
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 13 Proteins
name
LOC667842
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:667842
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins
pseudo
: _no_value
name
Lancl1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:133892201
GeneID:14768
MGI:1336997
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: LanC (bacterial lantibiotic synthetase component C)-like 1
transcript_id
: NM_021295.2
name
Cps1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124248511
GeneID:227231
MGI:891996
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: carbamoyl-phosphate synthetase 1
transcript_id
: NM_001080809.1
name
Erbb4
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:94363428
GeneID:13869
MGI:104771
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 10 Proteins
product
: v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian), transcript variant 1
transcript_id
: XM_001002143.1
name
Erbb4
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:94363426
GeneID:13869
MGI:104771
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins
product
: v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian), transcript variant 2
transcript_id
: XM_136682.7
name
Lancl1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:21489937
CCDS:CCDS15025.1
GeneID:14768
MGI:1336997
definition
GO_component
: GO:0005887 - integral to plasma membrane [Evidence IEA]
GO_function
: GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0050750 - low-density lipoprotein receptor binding [Evidence ISS]
GO_process
: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]
codon_start
: 1
note
: G protein-coupled receptor 69; G protein-coupled receptor 69A; LanC-like protein 1; LanC (bacterial lantibiotic synthetase component C)-like
product
: LanC (bacterial lantibiotic synthetase component C)-like 1
protein_id
: NP_067270.1
name
Cps1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124248512
GeneID:227231
MGI:891996
definition
GO_component
: GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]
GO_function
: GO:0005524 - ATP binding [Evidence IEA]; GO:0004087 - carbamoyl-phosphate synthase (ammonia) activity [Evidence IEA]; GO:0004086 - carbamoyl-phosphate synthase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO_process
: GO:0006526 - arginine biosynthesis [Evidence IEA]; GO:0006541 - glutamine metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006807 - nitrogen compound metabolism [Evidence IEA]; GO:0019856 - pyrimidine base biosynthesis [Evidence IEA]; GO:0000050 - urea cycle [Evidence IEA]
codon_start
: 1
note
: CPSase I; carbamoylphosphate synthetase I
product
: carbamoyl-phosphate synthetase 1
protein_id
: NP_001074278.1
name
Erbb4
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:94363429
GeneID:13869
MGI:104771
definition
codon_start
: 1
product
: v-erb-a erythroblastic leukemia viral oncogene homolog 4 isoform 1
protein_id
: XP_001002143.1
name
Erbb4
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:94363427
GeneID:13869
MGI:104771
definition
codon_start
: 1
product
: v-erb-a erythroblastic leukemia viral oncogene homolog 4 isoform 2
protein_id
: XP_136682.7
name
(CDS detail)
type
STS
link
xref
UniSTS:178407
definition
standard_name
: AW124738
name
(CDS detail)
type
STS
link
xref
UniSTS:128723
definition
standard_name
: D1Mit364
name
(CDS detail)
type
STS
link
xref
UniSTS:142234
definition
standard_name
: D1Mcg1
name
(CDS detail)
type
STS
link
xref
UniSTS:128686
definition
standard_name
: D1Mit328
name
(CDS detail)
type
STS
link
xref
UniSTS:123382
definition
standard_name
: 18.MMHAP46FRF9.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:224383
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:128516
definition
standard_name
: D1Mit178
name
(CDS detail)
type
STS
link
xref
UniSTS:145990
definition
standard_name
: AU049543
name
LOC667842
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149233881
GeneID:667842
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins
product
: similar to ribosomal protein L21
pseudo
: _no_value
transcript_id
: XR_033906.1
clone name
MSMg01-184L07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-529J13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-262G06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-400E12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-443D02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-095G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-095I12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-185J15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-447L13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-159A10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-465I09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125K05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-263K13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-368C10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-424I18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-343D17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-466O01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-389L05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-375M08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-188H04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-321A03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-460I19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-288H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-193F15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-500P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-127G09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-538O01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-452B20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-368A24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-312C08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-274K10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-274K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-333J10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-326I23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-320L20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-529F23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-157G15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-365B13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-361F20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-134C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-457E20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495K06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-110G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065I02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-236K05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-354B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-196J23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-191L11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-339G23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-107N18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-497B10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-188G24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-305O05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-478D21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-431K06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-432K07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-422D12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-218G10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-361G12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-505H17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-430A08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-505N08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-339O05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-485H16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-409F21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-394H13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-359D01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-050N03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-233B09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521F02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-092G16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-093F09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-355D24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-522A05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-460O21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-303M09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-367B09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-391A23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-097I08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-047F14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-419O03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-070N05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-074L17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-498B02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-434H04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-374N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-477E13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-203E11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-089G03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-114C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-380K22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-341M06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-216M04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-359A24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-085N01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-190G01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-332A06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-093A11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-126N07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-367F05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-474D09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-138O03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-202J09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-202J10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-261O17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-517O18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-472N14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-181K21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-479C24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-451O11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-484E02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-327O04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-458N19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-478I03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-180G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-153D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-086H12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-447L19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-196K07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-437H21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-237D02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-538D03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-469N02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-288B07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-164J16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-460H19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-389M05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-058E01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-477E18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-334D16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-202A03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-072A17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-290F15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-118I03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-154K23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-519J03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-527G13
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-392D22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-366F06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-134O24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206H04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005D23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-178K03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203F06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-309H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-188P03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-253B19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-213H02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-220J01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-077I22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-235L11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-064B05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-288H15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-113I04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-156B13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-092P11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-234L18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-350A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-182I20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-183I11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-228D22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-188D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-199H13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-148B21
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