Query= MSMg01no361_h23.b1 MSMg01no361_h23.b1 CHROMAT_FILE:
MSMg01no361_h23.b1 PHD_FILE: MSMg01no361_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:33 2005
(639 letters)
>mm_chr1_95814363_95815402
Length = 1040
Score = 758 bits (392), Expect = 0.0
Identities = 507/548 (92%), Gaps = 9/548 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagagcacattcaatgtgtggagagatgtaatgagccacaactttacaattaac 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggaattcagagcacactaaatgtgtggagagatgtaatgagccacaactttacaattaac 483
Query: 64 tttatgtgaatcattttctagcagcagca--a-gttgtagttcaaattttttccagaaac 120
||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 482 tttatgtgaatcattttctagcagcagcagcaggttgtagttcaatttttttccagaaac 423
Query: 121 tgatagcaggaaaaaaatatggtaggtgtattcagccttccagactgccaggtcatgaga 180
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgatagcagg-aaaaaatacggtaggtgtattcagccttccagactgccaggtcatgaga 364
Query: 181 caagccaagtgatagagaatagtgtgtagaccacatgactgaaagtcgcttctattgatt 240
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 caagccaaatgatagagaacagtgtgtagaccacatgactgaaagtcgcttctattgatt 304
Query: 241 cagttagggaattgtcccatacccagaaaggtcaagctctgcaggcaatcatagccctcc 300
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 303 cagttagggaactgtcccatacccagaaaggtcaggctctgcaggcaatcatagccctcc 244
Query: 301 acacctgcttaccaaccagacaggtcctcaagaacaaggtaagctgggtgtagtggcact 360
| | || |||| ||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 243 atatcttcttag-aaccagacaggtctttaagaacaaggtaagctgggtgtagtggcact 185
Query: 361 tgcctttaatcccattgctcaggggccagaagcaaagtcaggggcatggaggatctctgt 420
||||||||||| ||||||||||||| |||||| |||| ||| ||||||||||| ||||||
Sbjct: 184 tgcctttaatcacattgctcagggggcagaagtaaaggcagaggcatggaggagctctgt 125
Query: 421 gagttaaaggtctatctatctggtctacattgtaagttccagaacagtcagagttaagta 480
||||||||||||||||| ||||||||| |||||||||||||||| ||| ||| |||
Sbjct: 124 gagttaaaggtctatct----ggtctacatcataagttccagaacagtaagaattacgta 69
Query: 481 gagagaccctggctcaaaacaaacaaaacctgagggaatggcctggccgggtagaccaca 540
|||||| |||| || ||||||||||||||||||||||||| ||| ||| ||| |||||||
Sbjct: 68 gagagaacctgtcttaaaacaaacaaaacctgagggaatgtcctagccaggtggaccaca 9
Query: 541 gttaccaa 548
||||||||
Sbjct: 8 gttaccaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space: 647870
Effective search space used: 647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_h23.g1 MSMg01no361_h23.g1 CHROMAT_FILE:
MSMg01no361_h23.g1 PHD_FILE: MSMg01no361_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:34 2005
(391 letters)
>mm_chr1_95593373_95594163
Length = 791
Score = 733 bits (379), Expect = 0.0
Identities = 388/391 (99%)
Strand = Plus / Plus
Query: 1 catgcaaatagtggggtgctcctaactacactggacaatgtggggaaagaaaatggtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgcaaatagtggggtgctcctaactacactggacaatgtggggaaagaaaatggtgga 260
Query: 61 catggtttcaaattccaagctctagcattctataaaagcactcagagcaaatagagactc 120
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 catggtttcaaattccaagctctagcattctataaaagtgctcagagcaaatagagactc 320
Query: 121 tatcttcctcagccacagagttgaggttgctgagcatgcagcccagagccgctcctcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatcttcctcagccacagagttgaggttgctgagcatgcagcccagagccgctcctcact 380
Query: 181 agcgcctggacgtggcacaggctgaactggtctcacggggatctcttgttaaaagggtcg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 agcgcctggacgtggcacaggctgaactggtctcatggggatctcttgttaaaagggtcg 440
Query: 241 gcaggagctggggtgaatttcatggaaggccatgaggaagctggggacactgggcctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaggagctggggtgaatttcatggaaggccatgaggaagctggggacactgggcctaat 500
Query: 301 gaggggtcctagcccacagaaacagctcctcacagctgcaagtctctccctctgaggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaggggtcctagcccacagaaacagctcctcacagctgcaagtctctccctctgaggaga 560
Query: 361 gggagccccaccacaggagatgactaccagc 391
|||||||||||||||||||||||||||||||
Sbjct: 561 gggagccccaccacaggagatgactaccagc 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
