ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAATGCAATCCCCATCAAAATTCCAACCCAATTCTTCACCGAGTTAGA
AAGGGCAATTTGCAAATTCATCTGGAATAACAAAAAAACCTACGATAGCA
AAAACTATTCTCAACATTAAAAGAATCTCTGGTGGAATCACCATGCCTGA
CCTCAAGCTGTACTACAGAGCAATTGTGATCAAAACTGCATGTTACTGGC
ACAGCAATAGACAGGTAGATCAATGGAATAGAATTAAAGATACAGAAATG
AACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCAT
CCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTCCTGGCACAACTGGC
AGTTATCGTGTAGAATGCGAATTGATCCATTCTTATCTCCTTATACAAAA
CTCAAGTCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGATACTGAA
ACTTACAGAGGAGAAAGTGGGGAAAAACCTCAAAAGATATGGACACAGGG
GAAAAATTCCTGAACAGAATGGCATTGCCTTGTGCTGTAAGATTGAGAAT
CGACAAATGGAACCTCATAAAATTGCAAAGCTTCTGTAAGGCATAGACAC
TGTCAATAAGACAAAAAGGTCATCAACAGATTGTGAAAAGAATCTTTACC
AATCCTAAATCCGATAGGGAACTAATATCTATCCTCAATTCTCAGTACAG
TGTAAAGCTG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCAGACTTCTGCTTAGTTCTGCCCACACTG
TGTAGGCTCCCGCAGGGCAGGTACTAAGGCCTGGGGCCGGCTTTCCTTGT
ATCCTCACAGGCCCTCCAGAGGCCTTTCTCTTGTCAGTAGGTGGGAGATG
AAGACTGAAAGAGCTTTTTAGGGAACTATCAGCCCTTTGTTTAGAAATGG
CATTTCTTCCTTAAGGACTGCTCTTCTCTTCAGAGGTCTCCAGTGCCAGG
CCACAGACCTAAAGCAGTGCCTGTCAGCGGCTTTAGAGCCGGGCAACCAG
CCAGACTCCTGGTGCTGCTGCCGCCAACTGTGAAGCCTCAGGGAGCCAGC
TCAGTGCTTGGTGATACAGTGGTAATGTACCTCATCAGACTGCCCTGTGG
ACTGAATGCAACAATGTATCCAGTTGAGCACCTGGCACAGAACAGGTATT
TAATCTGGGGAAATATCTCAGGTGCCAGGTGTACAGATAGGATACCAGTG
ATAAGGGGCAAGGGTGGATTCAGTTTGTAACCACTTCAGCTGTGCATTTC
AGAGGTTCCCATCTTATTCTGTGTGGAAGAGAGAACATATTCAGCTCACA
GTGATAGACAGTAAGAGAAAGTGCATAAAATGCCCAGTGAATGGGTTCCA
ATCATTGTTGGGTTCTTCTACCAATTTATTTACTCGAACAAAGGACTTGG
CACTGTGTAAATAA

Query= MSMg01no362_f01.g1 MSMg01no362_f01.g1 CHROMAT_FILE:
MSMg01no362_f01.g1 PHD_FILE: MSMg01no362_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:38 2005
         (500 letters)



>mm_chr1_38364704_38365602
          Length = 899

 Score =  926 bits (479), Expect = 0.0
 Identities = 495/501 (98%), Gaps = 3/501 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagacttctgcttagttctgcccacactgtgtaggctcccgcagggcaggtactaaggcc 60
           |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||
Sbjct: 201 cagacttctgcttagttctgcccacac--tgtaggctcccgcagggcaggcactaaggcc 258

                                                                       
Query: 61  tgggg-ccggctttccttgtatcctcacaggccctccagaggcctttctcttgtcagtag 119
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tggggcccggctttccttgtatcctcacaggccctccagaggcctttctcttgtcagtag 318

                                                                       
Query: 120 gtgggagatgaagactgaaagagctttttagggaactatcagccctttgtttagaaatgg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtgggagatgaagactgaaagagctttttagggaactatcagccctttgtttagaaatgg 378

                                                                       
Query: 180 catttcttccttaaggactgctcttctcttcagaggtctccagtgccaggccacagacct 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 catttcttccttaaggactgctcttctcttcagaggtctccagtgccaggccacagacct 438

                                                                       
Query: 240 aaagcagtgcctgtcagcggctttagagccgggcaaccagccagactcctggtgctgctg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaagcagtgcctgtcagcggctttagagccgggcaaccagccagactcctggtgctgctg 498

                                                                       
Query: 300 ccgccaactgtgaagcctcagggagccagctcagtgcttggtgatacagtggtaatgtac 359
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 499 ccgccaactgtgaagcctcagggagcctgctcagtgcttggtgatacagtggtaatgtac 558

                                                                       
Query: 360 ctcatcagactgccctgtggactgaatgcaacaatgtatccagttgagcacctggcacag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 559 ctcatcagactgccctgtggactgaatgcaacaatgtatccagttgagcgcctggcacag 618

                                                                       
Query: 420 aacaggtatttaatctggggaaatatctcaggtgccaggtgtacagataggataccagtg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aacaggtatttaatctggggaaatatctcaggtgccaggtgtacagataggataccagtg 678

                                
Query: 480 ataaggggcaagggtggattc 500
           |||||||||||||||||||||
Sbjct: 679 ataaggggcaagggtggattc 699


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 899
Length adjustment: 10
Effective length of query: 490
Effective length of database: 889
Effective search space:   435610
Effective search space used:   435610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)