Query= MSMg01no362_n16.b1 MSMg01no362_n16.b1 CHROMAT_FILE:
MSMg01no362_n16.b1 PHD_FILE: MSMg01no362_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:22 2005
(467 letters)
>mm_chr1_154853597_154854463
Length = 867
Score = 864 bits (447), Expect = 0.0
Identities = 459/463 (99%)
Strand = Plus / Plus
Query: 5 gaattctccaaacttgcacaaagacccagagttctggccaaagccaacaacaacaagaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccaaacttgcacaaagacccagagttctggccaaagccaacaacaacaagaaa 264
Query: 65 atgtttactaatttagttttatataaggggttttctaggagcaggtatcaagggcacaca 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atatttactaatttagttttatataaggggttttctaggagcaggtatcaagggcacaca 324
Query: 125 gtgaatttttattctagagcgttgtgaccagtaaataaatggaccacatcaatatttggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgaatttttattctagagcgttgtgaccagtaaataaatggaccacatcaatatttggg 384
Query: 185 gctctctgcaagaagaactagaacattctatatccagttacagctgcatgaacaaacacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctctctgcaagaagaactagaacattctatatccagttacagctgcatgaacaaacacc 444
Query: 245 tgcctctccctgcttcctgctgagccaggccttggcaaggcagcagaatggaagcagccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgcctctccctgcttcctgctgagccaggccttggcaaggcagcagaatggaagcagccc 504
Query: 305 agagggctgtgcttcccagagcctgagctggctccatctcatacgtcccctaagatgacc 364
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 505 agagggctgtgcttcccagagcctgagctggctccatctcatgcgtcccctaagatgacc 564
Query: 365 agatacctccttcttgtcctgtacccaaggcaggtcagctacatgcagaagagacgtaga 424
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 565 agatacctccttcttgtcctgtacccaaggcaggtcagctacatccagaagagacgtaga 624
Query: 425 ttcagaggtcacatgactcaagttatgatataatccataaaat 467
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 625 ttcagaggtcacatgactcaagttatgatataatccagaaaat 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_n16.g1 MSMg01no362_n16.g1 CHROMAT_FILE:
MSMg01no362_n16.g1 PHD_FILE: MSMg01no362_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:22 2005
(471 letters)
>mm_chr1_155027133_155028003
Length = 871
Score = 748 bits (387), Expect = 0.0
Identities = 417/429 (97%), Gaps = 4/429 (0%)
Strand = Plus / Minus
Query: 1 aaaactagacagattacctaaaccttgagctgcactttatgtggaagacgacttacaaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 429 aaaactagacagattacctaaaccttgagctgcactttatgtggaagacgtcttacaaca 370
Query: 61 aaggcttacacatccccattgtttcctagagccacatgcttatccctgtccagggcaggg 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 369 aaggcttacacatccccattggttcctagagccacatgcttatccctgtccagagcaggg 310
Query: 121 cagggcctaagtaggagctccattccttctgaagtaaccttgcttagtcccacaggaccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cagggcctaagtaggagctccattccttctgaagtaaccttgcttagtcccacaggaccg 250
Query: 181 aatgagagtgtatcaggcactgagagtgtatgggacactgaatgagagtggacctaagag 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 249 aatgagagtgtatcaggcactgagagtgtattggacactgaatgagagtggacctaagag 190
Query: 241 atctctatgcaacctcttgttttctaagagaggatgatgataatcggggaggtaaaatca 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 189 atctctatgcaacctcttgttttctaagagaggatgatgataatcagggaggtaaaatca 130
Query: 301 ctgcctggtttcccatagtcaagttgggttcagcaagaagaatgcatgt----atgccag 356
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 129 ctgcctggtttcccatagccaagttgggttcagcaagaagaatgcatgtatgcatgccag 70
Query: 357 ggaagttgagaaccaaagactgccttagctagaaccctacagttagtaacagggccaaga 416
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 69 ggaagttgagaaccaaagactgccttagctagaatcctacagttagtaacagggccaaga 10
Query: 417 ttcacctgt 425
||||||||
Sbjct: 9 ctcacctgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
