XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TTGTTCTGTTCTGAGCCCCATTTTTTAATGGGGTTGTTTGATTTTCTGAA
GTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTG
ATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTTGTC
TTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTC
CCATTTGTCAATTCTCGATCTTACAGAACAAGCCATTGCTGTTCTGTTCA
GGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCC
TCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTT
AGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTC
TACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCT
TTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATA
NGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTT
GTCTGTCTCTATACCCGTACCATGCTGTTTTTACCACAATTGCTCTGTAG
TAAAGCTTTAGGCCCGGGATGTTGATTCCACCAGAGGTTCTTTTTATCCT
GAAAAAAATTTTTGCTATCCCAGTCTTTGGGCACCCCGTATTATTT

NNTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCTTAAAAAAGAAA
AGAAAAGAAAAAAAGGGAAAAAACCCTTCATTCATTTTTTTTCTCCAATA
TTTTTAAAATCTCACAGATGGATTAGTAAGAGGAATCACTTGTACACTTC
CTGCTTGGCATTGCTGATAATTGGAGAAGCTATTTCAATCCTTGAAATTT
CTTTTGTAAACAAATGCATGTAAATAAATCTATAAGTTTATTCATGTCTT
CGATACATCCTGGTTTGTGGCAAATATTTAAAGTTATGTGAAAATGATTT
CCTGTTAGATTAAGCATCTAGATATTGCTTAACAGATCTTGCTGATAATG
AATGCTATAATTTTTTAGAACTGTCAATAGGTTGTAGGTATAGAAACTTC
CTTTGCTTAGATACATAGGCTGATTAAGATTACCACCAAGCAGGCTATTT
AAGCATACACAGAACATTTCCAAAATAAACAAATGCTTTCTTCAAGAAAC
TGTACCCATAAACTTGTGAGTGATATAATGAAGTTTAAATAAAAAGGGTT
CTATATGTGTATAATATATTTCATATTACTTTCGGATTGATTTAACTTTG
GCAATCAGCTTTCCCTACTGTCATGGTAAAAGGTATCTTGGAAGCCATAT
TGAGTGCATTTGTTTTAAAAAATTATCTGGAATACTCTTTAAAAACTTAA
CAG

Query= MSMg01no363_f09.g1 MSMg01no363_f09.g1 CHROMAT_FILE:
MSMg01no363_f09.g1 PHD_FILE: MSMg01no363_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:00 2005
         (499 letters)



>mm_chr1_79434429_79435327
          Length = 899

 Score =  891 bits (461), Expect = 0.0
 Identities = 488/497 (98%), Gaps = 2/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   cttaaaaaagaaaagaaaagaaaaaaagggaaaaaacccttcattcattttttttctcca 63
           ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||
Sbjct: 204 cttaaaaaagaaaagaaaagaaaaaaaggtaaaaaaaccttcattcattttttt-ctcca 262

                                                                       
Query: 64  atatttttaaaatctcacagatggattagtaagaggaatcacttgtacacttcctgcttg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atatttttaaaatctcacagatggattagtaagaggaatcacttgtacacttcctgcttg 322

                                                                       
Query: 124 gcattgctgataattggagaagctatttcaatccttgaaatttcttttgtaaacaaatgc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcattgctgataattggagaagctatttcaatccttgaaatttcttttgtaaacaaatgc 382

                                                                       
Query: 184 atgtaaataaatctataagtttattcatgtcttcgatacatcctggtttgtggcaaatat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 383 atgtaaataaatctataagtttattcatgtcttcgatacatcctggtttgtggcaaataa 442

                                                                       
Query: 244 ttaaagttatgtgaaaatgatttcctgttagattaagcatctagatattgcttaacagat 303
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcaaagttatgtgaaaatgatttcctgttagattaagcatctagatattgcttaacagat 502

                                                                       
Query: 304 cttgctgataatgaatgctataatttttt-agaactgtcaataggttgtaggtatagaaa 362
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 503 cttgctgataatgaatgctataatttttttagaactgtcaataggttgtaggtatagaaa 562

                                                                       
Query: 363 cttcctttgcttagatacataggctgattaagattaccaccaagcaggctatttaagcat 422
           ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 563 cttcctttgcttacatacataggctgattaagattaccaccaagtaggctatttaagcat 622

                                                                       
Query: 423 acacagaacatttccaaaataaacaaatgctttcttcaagaaactgtacccataaacttg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 acacagaacatttccaaaataaacaaatgctttcttcaagaaactgtacccataaacttg 682

                            
Query: 483 tgagtgatataatgaag 499
           |||||||||||||||||
Sbjct: 683 tgagtgatataatgaag 699


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space:   434721
Effective search space used:   434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)